Rs5443

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dbSNPrs5443
nextbiors5443
hapmaprs5443
1000 genomesrs5443
hgdprs5443
ensemblrs5443
gopubmedrs5443
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openSNPrs5443
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23andMe allrs5443
SNP Nexus

SNPshotrs5443
SNPdbers5443
MSV3drs5443
GeneGNB3
Chromosome12
Orientationplus
Position6954875
ReferenceGRCh37 37.1/131
Max Magnitude2.4
Geno Mag Summary
(C;C) 1.5 normal, but higher risk for several conditions
(C;T) 2.1 some risk
(T;T) 2.4 sibutramine has no effect
? (C;C) (C;T) (T;T) 28
rs5443, a SNP in the G-protein beta3 subunit (GNB3) gene that is more commonly known as the C825T variant, has been linked to a number of metabolic conditions including obesity, coronary artery disease, insulin resistance and therefore diabetes, left ventricular hypertrophy, and hypertension. It has also been linked to how well a patient responds to Viagra (sildenafil). Several studies have been unable to replicate one or more of the associations in at least some populations between this SNP and these conditions. The more notable studies include:


[PMID 19560507] Interaction of serotonin-related genes affects short-term antidepressant response in major depressive disorder

[PMID 19772422] Common Variants in the G Protein beta3 Subunit Gene and Thyroid Disorders in a Formerly Iodine-Deficient Population

[PMID 19811352] Lack of an association of GNB3 C825T polymorphism and blood pressure in patients with rheumatoid arthritis

PharmGKBPA165109228
Name
AnnotationRisk or phenotype-associated allele: T. Phenotype: Among GNB3 T allele carriers, the risk of diabetes due to thiazide use was less increased than among homozygous GNB3 CC subjects . Study size: 497 incident cases of type 2 diabetes and 2,633 controls. metric(s): (SI 0.62 (95% CI: 0.41-0.93). Type of association: GN.
GeneGNB3, USP5
FeatueExon/Syn, Intron
EvidencePubMed ID:19247266
Drugs
DiseasesDiabetes Mellitus, Type 2
Curation LevelCurated
PharmGKBPA161145077
NameGNB3:825C>T, GNB3:Ser275Ser
AnnotationExtensively studied, found to be associated with many things, including blood pressure and hypertension.
GeneGNB3, USP5
FeatueExon/Syn, Intron
EvidencePubMed ID:1600156; PubMed ID:16707857; PubMed ID:17278960; PubMed ID:17663734; PubMed ID:17701674; PubMed ID:17785925
Drugs
Diseases
Curation LevelCurated
PharmGKBPA161822201
NameGNB3:825C>T, GNB3:Ser275Ser
AnnotationThis variant is associated with sildenafil response for erectile dysfunction patients.
GeneGNB3, USP5
FeatueExon/Syn, Intron
EvidencePubMed ID:12576843
Drugssildenafil
DiseasesErectile Dysfunction
Curation LevelCurated
PharmGKBPA161845790
NameGNB3:825C>T, GNB3:Ser275Ser
AnnotationThis variant is associated with statin response. Patients carring T allele have less risk of MI and are more likely to benefit from statin therapy in a hypercholesterolemic population of antihypertensive drug users.
GeneGNB3, USP5
FeatueExon/Syn, Intron
EvidencePubMed ID:18551043
Drugsatorvastatin, fluvastatin, lovastatin, pravastatin, rosuvastatin, simvastatin
DiseasesHypercholesterolemia
Curation LevelCurated
PharmGKBPA161845791
NameGNB3:825C>T, GNB3:Ser275Ser
AnnotationThis variant (C allele carriers) is associated with an increased risk for the development of oncocytic thyroid tumours.
GeneGNB3, USP5
FeatueExon/Syn, Intron
EvidencePubMed ID:17136758
Drugs
DiseasesThyroid Neoplasms
Curation LevelCurated
PharmGKBPA162263548
NameGNB3:825C>T, GNB3:Ser275Ser
AnnotationA study on A total of 180 migraine and cluster headache patients found that pain relief by triptans is significantly modulated by this common genetic GNB3 variant.
GeneGNB3, USP5
FeatueExon/Syn, Intron
EvidencePubMed ID:17361120
Drugsalmotriptan
DiseasesMigraine without Aura
Curation LevelCurated
PharmGKBPA162364006
NameGNB3:825C>T, GNB3:Ser275Ser
AnnotationA study on a total of 180 migraine and cluster headache patients found that pain relief by triptans is significantly modulated by this common genetic GNB3 variant.
GeneGNB3, USP5
FeatueExon/Syn, Intron
EvidencePubMed ID:17361120
Drugsalmotriptan, eletriptan, naratriptan, rizatriptan, sumatriptan, zolmitriptan
DiseasesMigraine without Aura
Curation LevelCurated
PharmGKBPA164889042
NameGNB3:825C>T
AnnotationT allele is associated with olanzapine-induced weight gain
GeneGNB3, USP5
FeatueExon/Syn, Intron
EvidencePubMed ID:19193342
Drugsolanzapine
DiseasesWeight gain
Curation LevelCurated


[PMID 21371559] Effects of C825T polymorphism of the GNB3 gene on availability of dopamine transporter in healthy volunteers-a SPECT study


[PMID 21675276] [A protective effect of GLY272SER polymorphism of GNB3 gene in development of essential hypertension and its relations with environmental hypertension risk factors]


[PMID 22041889] Improvement of non-steroidal anti-inflammatory drug-induced gastrointestinal symptoms during proton pump inhibitor treatment: Are g-protein (beta)3 subunit genotype, helicobacter pylori status, and environmental factors response modifiers?

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