Rs12720067

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is asnp
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dbSNPrs12720067
hapmaprs12720067
hgdprs12720067
ensemblrs12720067
gopubmedrs12720067
scholarrs12720067
googlers12720067
pharmgkbrs12720067
hgvbaseg2prs12720067
medrefsnprs12720067
23andMers12720067
SNP Nexus

GeneABCB1
Chromosome7
Orientationminus
Position87007291
GenotypeEffect
rs12720067(A;A)7x more likely to respond to certain antidepressants
rs12720067(A;G)7x more likely to respond to certain antidepressants
rs12720067(G;G)7x less likely to respond to certain antidepressants


Genotypes Magnitude Summary
Rs12720067(A;A) 7x more likely to respond to certain antidepressants
Rs12720067(A;G) 7x more likely to respond to certain antidepressants
Rs12720067(G;G) 7x less likely to respond to certain antidepressants
rs12720067 is a SNP in the ABCB1 gene (also known as the MDR1 gene), which encodes a protein that transports certain molecules across the blood-brain barrier. SNPs in ABCB1 may thus influence the intracerebral concentrations of certain drugs and thus their efficacy or potential for adverse side effects. rs12720067 is one of 9 SNPs found within a tight linkage block (r2 >= 0.8 ) such that the minor allele at any one of them predicts (with ~80%+ accuracy) that the other SNPs will also be the minor allele. The list of the 9 SNPs is shown below.

When treated for depression with substrates of the protein encoded by ABCB1, carriers of one or two minor alleles at these ABCB1 SNPs have been reported to respond better than non-carriers. The antidepressant drugs that are known to be substrates include citalopram, paroxetine, amitriptyline, and venlafaxine. The relative odds of better response for rs12720067(G) carriers is 7.72 (CI: 2.8-21.3, p=0.000065) based on a study of ~400 primarily Caucasian patients.10.1016/j.neuron.2007.11.017

The 9 SNPs in the linkage block identified are 10.1016/j.neuron.2007.11.017:

? (A;A) (A;G) (G;G)
PharmGKBPA161615700
Name
AnnotationThis variant is associated with differences in clinical efficacy of antidepressants, most likely by influencing their access to the brain.
GeneABCB1
Featue
EvidencePubMed ID:18215618
Drugsamitriptyline, citalopram, paroxetine, venlafaxine
DiseasesDepression
Curation LevelCurated