Rs11983225

From SNPedia

Jump to: navigation, search
is asnp
is mentioned by
dbSNPrs11983225
hapmaprs11983225
hgdprs11983225
ensemblrs11983225
gopubmedrs11983225
scholarrs11983225
googlers11983225
pharmgkbrs11983225
hgvbaseg2prs11983225
medrefsnprs11983225
23andMers11983225
SNP Nexus

GeneABCB1
Chromosome7
Orientationplus
Position86999455
GenotypeEffect
rs11983225(C;C)7x more likely to respond to certain antidepressants
rs11983225(C;T)7x more likely to respond to certain antidepressants
rs11983225(T;T)7x less likely to respond to certain antidepressants


Genotypes Magnitude Summary
Rs11983225(C;C) 7x more likely to respond to certain antidepressants
Rs11983225(C;T) 7x more likely to respond to certain antidepressants
Rs11983225(T;T) 7x less likely to respond to certain antidepressants
rs11983225 is a SNP in the ABCB1 gene (also known as the MDR1 gene), which encodes a protein that transports certain molecules across the blood-brain barrier. SNPs in ABCB1 may thus influence the intracerebral concentrations of certain drugs and thus their efficacy or potential for adverse side effects. rs11983225 is one of 9 SNPs found within a tight linkage block (r2 >= 0.8 ) such that the minor allele at any one of them predicts (with ~80%+ accuracy) that the other SNPs will also be the minor allele. The list of the 9 SNPs is shown below.

When treated for depression with substrates of the protein encoded by ABCB1, carriers of one or two minor alleles at these ABCB1 SNPs have been reported to respond better than non-carriers. The antidepressant drugs that are known to be substrates include citalopram, paroxetine, amitriptyline, and venlafaxine. The relative odds of better response for rs11983225(T) carriers is 7.72 (CI: 2.8-21.3, p=0.000065) based on a study of ~400 primarily Caucasian patients.10.1016/j.neuron.2007.11.017

The 9 SNPs in the linkage block identified are 10.1016/j.neuron.2007.11.017:

? (C;C) (C;T) (T;T)
Neighborrs4148739
Distance471
PharmGKBPA161615697
Name
AnnotationThis variant is associated with differences in clinical efficacy of antidepressants, most likely by influencing their access to the brain.
GeneABCB1
Featue
EvidencePubMed ID:18215618
Drugsamitriptyline, citalopram, paroxetine, venlafaxine
DiseasesDepression
Curation LevelCurated