rs3775948
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 1.6 | slightly lower risk for gout |
| (C;G) | 1.6 | slightly higher risk for gout |
| (G;G) | 2 | slightly higher risk for gout |
| Reference | GRCh38 38.1/141 |
| Chromosome | 4 |
| Position | 9993558 |
| Gene | LOC105374476, SLC2A9 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs3775948 |
| dbSNP (classic) | rs3775948 |
| ClinGen | rs3775948 |
| ebi | rs3775948 |
| HLI | rs3775948 |
| Exac | rs3775948 |
| Gnomad | rs3775948 |
| Varsome | rs3775948 |
| LitVar | rs3775948 |
| Map | rs3775948 |
| PheGenI | rs3775948 |
| Biobank | rs3775948 |
| 1000 genomes | rs3775948 |
| hgdp | rs3775948 |
| ensembl | rs3775948 |
| geneview | rs3775948 |
| scholar | rs3775948 |
| rs3775948 | |
| pharmgkb | rs3775948 |
| gwascentral | rs3775948 |
| openSNP | rs3775948 |
| 23andMe | rs3775948 |
| SNPshot | rs3775948 |
| SNPdbe | rs3775948 |
| MSV3d | rs3775948 |
| GWAS Ctlg | rs3775948 |
| GMAF | 0.3237 |
| Max Magnitude | 2 |
gout association, based on [PMID 25646370
]
note that due to the possibility of ambiguous flipping between the C/G alleles of this SNP, care should be taken in interpreting alleles
| ? | (C;C) (C;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 21294900]
|
| Trait | |
| Title | A genome-wide association study of serum uric acid in African Americans |
| Risk Allele | G |
| P-val | 1E-9 |
| Odds Ratio | 0.1830 [0.12-0.24] unit decrease |
| GWAS snp | |
|---|---|
| PMID | [PMID 22797727]
|
| Trait | Renal function-related traits (urea) |
| Title | Meta-analysis identifies multiple loci associated with kidney function-related traits in east Asian populations. |
| Risk Allele | C |
| P-val | 2E-65 |
| Odds Ratio | .18 [0.16-0.20] mg/dl increase |
[PMID 25283508] Serum uric acid levels are associated with polymorphisms in the SLC2A9, SF1, and GCKR genes in a Chinese population
