rs875989907
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;G) | 5 | Familial Hypercholesterolemia |
(G;G) | 0 | common/normal |
(G;T) | 5 | Familial Hypercholesterolemia |
Make rs875989907(A;A) |
Reference | GRCh38.p7 38.3/150 |
Chromosome | 19 |
Position | 11106666 |
Gene | LDLR |
is a | snp |
is | mentioned by |
dbSNP | rs875989907 |
dbSNP (classic) | rs875989907 |
ClinGen | rs875989907 |
ebi | rs875989907 |
HLI | rs875989907 |
Exac | rs875989907 |
Gnomad | rs875989907 |
Varsome | rs875989907 |
LitVar | rs875989907 |
Map | rs875989907 |
PheGenI | rs875989907 |
Biobank | rs875989907 |
1000 genomes | rs875989907 |
hgdp | rs875989907 |
ensembl | rs875989907 |
geneview | rs875989907 |
scholar | rs875989907 |
rs875989907 | |
pharmgkb | rs875989907 |
gwascentral | rs875989907 |
openSNP | rs875989907 |
23andMe | rs875989907 |
SNPshot | rs875989907 |
SNPdbe | rs875989907 |
MSV3d | rs875989907 |
GWAS Ctlg | rs875989907 |
Max Magnitude | 5 |
aka c.796G>A (p.Asp266Asn or D266N) and also c.796G>T (p.Asp266Tyr or D266Y), both of which are considered likely to be pathogenic for familial hypercholesterolemia in ClinVar
ClinVar | |
---|---|
Risk | rs875989907(A;A) rs875989907(T;T) |
Alt | rs875989907(A;A) rs875989907(T;T) |
Reference | Rs875989907(G;G) |
Significance | Other |
Disease | Familial hypercholesterolemia |
Variation | info |
Gene | LDLR |
CLNDBN | Familial hypercholesterolemia |
Reversed | 0 |
HGVS | NC_000019.9:g.11217342G>A; NC_000019.9:g.11217342G>T |
CLNSRC | LDLR @ LOVD |
CLNACC | RCV000211615.3, RCV000237807.1, |