rs863225322
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;GA) | 6.5 | Familial Adenomatous Polyposis |
(-;GAGA) | 6.5 | Familial Adenomatous Polyposis |
(AGAG;AGAG) | 0 | common in clinvar |
(GA;GA) | 0 | common/normal |
Make rs863225322(-;-) |
Make rs863225322(GAGA;GAGA) |
Reference | GRCh38.p2 38.2/146 |
Chromosome | 5 |
Position | 112837566 |
Gene | APC |
is a | snp |
is | mentioned by |
dbSNP | rs863225322 |
dbSNP (classic) | rs863225322 |
ClinGen | rs863225322 |
ebi | rs863225322 |
HLI | rs863225322 |
Exac | rs863225322 |
Gnomad | rs863225322 |
Varsome | rs863225322 |
LitVar | rs863225322 |
Map | rs863225322 |
PheGenI | rs863225322 |
Biobank | rs863225322 |
1000 genomes | rs863225322 |
hgdp | rs863225322 |
ensembl | rs863225322 |
geneview | rs863225322 |
scholar | rs863225322 |
rs863225322 | |
pharmgkb | rs863225322 |
gwascentral | rs863225322 |
openSNP | rs863225322 |
23andMe | rs863225322 |
SNPshot | rs863225322 |
SNPdbe | rs863225322 |
MSV3d | rs863225322 |
GWAS Ctlg | rs863225322 |
Max Magnitude | 6.5 |
aka c.1970_1971delGA and c.1970_1971delGAGA; both are considered pathogenic in ClinVar for familial adenomatous polyposis
ClinVar | |
---|---|
Risk | rs863225322(-;-) |
Alt | rs863225322(-;-) |
Reference | Rs863225322(AGAG;AGAG) |
Significance | Pathogenic |
Disease | not provided Familial adenomatous polyposis 1 |
Variation | info |
Gene | APC |
CLNDBN | not provided Familial adenomatous polyposis 1 |
Reversed | 0 |
HGVS | NC_000005.9:g.112173263_112173266delGAGA |
CLNSRC | |
CLNACC | RCV000202030.2, RCV000233179.1, |