rs80359879
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;TTTGTGCTTTTCA) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(TTTGTGCTTTTCA;TTTGTGCTTTTCA) | 0 | common in clinvar |
Make rs80359879(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43104888 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80359879 |
dbSNP (classic) | rs80359879 |
ClinGen | rs80359879 |
ebi | rs80359879 |
HLI | rs80359879 |
Exac | rs80359879 |
Gnomad | rs80359879 |
Varsome | rs80359879 |
LitVar | rs80359879 |
Map | rs80359879 |
PheGenI | rs80359879 |
Biobank | rs80359879 |
1000 genomes | rs80359879 |
hgdp | rs80359879 |
ensembl | rs80359879 |
geneview | rs80359879 |
scholar | rs80359879 |
rs80359879 | |
pharmgkb | rs80359879 |
gwascentral | rs80359879 |
openSNP | rs80359879 |
23andMe | rs80359879 |
SNPshot | rs80359879 |
SNPdbe | rs80359879 |
MSV3d | rs80359879 |
GWAS Ctlg | rs80359879 |
Max Magnitude | 6 |
rs80359879, also known as 388del13, c.269_281del and p.Ile90_Gln94?fs, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | rs80359879(-;-) |
Alt | rs80359879(-;-) |
Reference | Rs80359879(TTTGTGCTTTTCA;TTTGTGCTTTTCA) |
Significance | Pathogenic |
Disease | Familial cancer of breast Breast-ovarian cancer |
Variation | info |
Gene | BRCA1 |
CLNDBN | Familial cancer of breast Breast-ovarian cancer, familial 1 |
Reversed | 1 |
HGVS | NC_000017.10:g.41256905_41256917delTGAAAAGCACAAA |
CLNSRC | Breast Cancer Information Core (BRCA1) |
CLNACC | RCV000047937.2, RCV000112179.3, |