rs80359307
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;A) | 6 | Likely miscall in 23andMe v5 data; otherwise, BRCA2 variant considered pathogenic for breast cancer |
(A;A) | 0 | common in clinvar |
Make rs80359307(-;-) |
Reference | GRCh38 38.1/142 |
Chromosome | 13 |
Position | 32333284 |
Gene | BRCA2 |
is a | snp |
is | mentioned by |
dbSNP | rs80359307 |
dbSNP (classic) | rs80359307 |
ClinGen | rs80359307 |
ebi | rs80359307 |
HLI | rs80359307 |
Exac | rs80359307 |
Gnomad | rs80359307 |
Varsome | rs80359307 |
LitVar | rs80359307 |
Map | rs80359307 |
PheGenI | rs80359307 |
Biobank | rs80359307 |
1000 genomes | rs80359307 |
hgdp | rs80359307 |
ensembl | rs80359307 |
geneview | rs80359307 |
scholar | rs80359307 |
rs80359307 | |
pharmgkb | rs80359307 |
gwascentral | rs80359307 |
openSNP | rs80359307 |
23andMe | rs80359307 |
SNPshot | rs80359307 |
SNPdbe | rs80359307 |
MSV3d | rs80359307 |
GWAS Ctlg | rs80359307 |
Merged from | Rs80359309 |
Max Magnitude | 6 |
rs80359307, also known as 2034delA, c.1806_1806delA and p.Gly602=fs, is a variant in the BRCA2 gene considered pathogenic for breast cancer in ClinVar.
Note that while rs80359307 and rs80359306 occur at a similar position in the BRCA2 gene, they represent a deletion versus an insertion, respectively.
ClinVar | |
---|---|
Risk | rs80359307(-;-) |
Alt | rs80359307(-;-) |
Reference | Rs80359307(A;A) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer not provided Hereditary cancer-predisposing syndrome Hereditary breast and ovarian cancer syndrome |
Variation | info |
Gene | BRCA2 |
CLNDBN | Breast-ovarian cancer, familial 2 not provided Hereditary cancer-predisposing syndrome Hereditary breast and ovarian cancer syndrome |
Reversed | 0 |
HGVS | NC_000013.10:g.32907428delA |
CLNSRC | Breast Cancer Information Core (BRCA2) |
CLNACC | RCV000031344.10, RCV000043896.5, RCV000132177.3, RCV000203637.2, |