rs80359303
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;AATAA) | 6 | BRCA2 variant considered pathogenic for breast cancer |
(-;ATAA) | 6 | BRCA2 variant considered pathogenic for breast cancer |
(AAAT;AAAT) | 0 | common in clinvar |
(ATAA;ATAA) | 0 | common in clinvar |
Make rs80359303(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 32333241 |
Gene | BRCA2 |
is a | snp |
is | mentioned by |
dbSNP | rs80359303 |
dbSNP (classic) | rs80359303 |
ClinGen | rs80359303 |
ebi | rs80359303 |
HLI | rs80359303 |
Exac | rs80359303 |
Gnomad | rs80359303 |
Varsome | rs80359303 |
LitVar | rs80359303 |
Map | rs80359303 |
PheGenI | rs80359303 |
Biobank | rs80359303 |
1000 genomes | rs80359303 |
hgdp | rs80359303 |
ensembl | rs80359303 |
geneview | rs80359303 |
scholar | rs80359303 |
rs80359303 | |
pharmgkb | rs80359303 |
gwascentral | rs80359303 |
openSNP | rs80359303 |
23andMe | rs80359303 |
SNPshot | rs80359303 |
SNPdbe | rs80359303 |
MSV3d | rs80359303 |
GWAS Ctlg | rs80359303 |
Max Magnitude | 6 |
rs80359303, also known as 1991del4, c.1763_1766delATAA and p.Asn588_Lys589?fs, is a variant in the BRCA2 gene considered pathogenic for breast cancer in ClinVar.
This mutation is considered a founder mutation in the Columbian Hispanic population.[PMID 30541753]
ClinVar | |
---|---|
Risk | rs80359303(-;-) |
Alt | rs80359303(-;-) |
Reference | Rs80359303(AAAT;AAAT) |
Significance | Pathogenic |
Disease | Hereditary breast and ovarian cancer syndrome Familial cancer of breast Breast-ovarian cancer Hereditary cancer-predisposing syndrome not provided |
Variation | info |
Gene | BRCA2 |
CLNDBN | Hereditary breast and ovarian cancer syndrome Familial cancer of breast Breast-ovarian cancer, familial 2 Hereditary cancer-predisposing syndrome not provided |
Reversed | 0 |
HGVS | NC_000013.10:g.32907378_32907381delATAA |
CLNSRC | Breast Cancer Information Core (BRCA2) |
CLNACC | RCV000043877.3, RCV000074515.5, RCV000077264.5, RCV000131054.3, RCV000254640.1, |