rs80359289
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;T) | 6 | BRCA2 variant considered pathogenic for breast cancer |
(T;T) | 0 | common in clinvar |
Make rs80359289(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 32333025 |
Gene | BRCA2 |
is a | snp |
is | mentioned by |
dbSNP | rs80359289 |
dbSNP (classic) | rs80359289 |
ClinGen | rs80359289 |
ebi | rs80359289 |
HLI | rs80359289 |
Exac | rs80359289 |
Gnomad | rs80359289 |
Varsome | rs80359289 |
LitVar | rs80359289 |
Map | rs80359289 |
PheGenI | rs80359289 |
Biobank | rs80359289 |
1000 genomes | rs80359289 |
hgdp | rs80359289 |
ensembl | rs80359289 |
geneview | rs80359289 |
scholar | rs80359289 |
rs80359289 | |
pharmgkb | rs80359289 |
gwascentral | rs80359289 |
openSNP | rs80359289 |
23andMe | rs80359289 |
SNPshot | rs80359289 |
SNPdbe | rs80359289 |
MSV3d | rs80359289 |
GWAS Ctlg | rs80359289 |
Max Magnitude | 6 |
rs80359289, also known as 1775delT, c.1547_1547delT and p.Phe516Serfs, is a variant in the BRCA2 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | rs80359289(-;-) |
Alt | rs80359289(-;-) |
Reference | Rs80359289(T;T) |
Significance | Pathogenic |
Disease | Familial cancer of breast Breast-ovarian cancer |
Variation | info |
Gene | BRCA2 |
CLNDBN | Familial cancer of breast Breast-ovarian cancer, familial 2 |
Reversed | 0 |
HGVS | NC_000013.10:g.32907162delT |
CLNSRC | Breast Cancer Information Core (BRCA2) |
CLNACC | RCV000043825.2, RCV000112933.2, |