rs80357772
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (-;AT) | 6 | Likely miscall in Ancestry data; otherwise, BRCA1 variant considered pathogenic for breast cancer |
| (AT;AT) | 0 | common in clinvar |
| (D;D) | 1 | Likely miscall in Ancestry data |
| Make rs80357772(-;-) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 17 |
| Position | 43094549 |
| Gene | BRCA1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs80357772 |
| dbSNP (classic) | rs80357772 |
| ClinGen | rs80357772 |
| ebi | rs80357772 |
| HLI | rs80357772 |
| Exac | rs80357772 |
| Gnomad | rs80357772 |
| Varsome | rs80357772 |
| LitVar | rs80357772 |
| Map | rs80357772 |
| PheGenI | rs80357772 |
| Biobank | rs80357772 |
| 1000 genomes | rs80357772 |
| hgdp | rs80357772 |
| ensembl | rs80357772 |
| geneview | rs80357772 |
| scholar | rs80357772 |
| rs80357772 | |
| pharmgkb | rs80357772 |
| gwascentral | rs80357772 |
| openSNP | rs80357772 |
| 23andMe | rs80357772 |
| SNPshot | rs80357772 |
| SNPdbe | rs80357772 |
| MSV3d | rs80357772 |
| GWAS Ctlg | rs80357772 |
| Max Magnitude | 6 |
rs80357772, also known as 1100delAT, c.981_982delAT and p.Thr327_Cys328ThrTerfs, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
| ClinVar | |
|---|---|
| Risk | rs80357772(-;-) |
| Alt | rs80357772(-;-) |
| Reference | Rs80357772(AT;AT) |
| Significance | Pathogenic |
| Disease | Hereditary breast and ovarian cancer syndrome Breast-ovarian cancer Hereditary cancer-predisposing syndrome Neoplasm of breast |
| Variation | info |
| Gene | BRCA1 |
| CLNDBN | Hereditary breast and ovarian cancer syndrome Breast-ovarian cancer, familial 1 Hereditary cancer-predisposing syndrome Neoplasm of breast |
| Reversed | 1 |
| HGVS | NC_000017.10:g.41246566_41246567delAT |
| CLNSRC | Breast Cancer Information Core (BRCA1) |
| CLNACC | RCV000049211.3, RCV000077636.5, RCV000162892.2, RCV000240695.1, |
