rs6502867

plus

Geno	Mag	Summary
(T;T)	0

Make rs6502867(C;C)

Make rs6502867(C;T)

Reference

GRCh38 38.1/141

Chromosome

17

Position

5517008

Gene

NLRP1

is a	snp
is	mentioned by
dbSNP	rs6502867
dbSNP (classic)	rs6502867
ClinGen	rs6502867
ebi	rs6502867
HLI	rs6502867
Exac	rs6502867
Gnomad	rs6502867
Varsome	rs6502867
LitVar	rs6502867
Map	rs6502867
PheGenI	rs6502867
Biobank	rs6502867
1000 genomes	rs6502867
hgdp	rs6502867
ensembl	rs6502867
geneview	rs6502867
scholar	rs6502867
google	rs6502867
pharmgkb	rs6502867
gwascentral	rs6502867
openSNP	rs6502867
23andMe	rs6502867
SNPshot	rs6502867
SNPdbe	rs6502867
MSV3d	rs6502867
GWAS Ctlg	rs6502867

GMAF

0.1483

Max Magnitude

0

?

(C;C) (C;T) (T;T)

28

linked to generalized vitiligo

[PMID 17637824] Individuals carrying high-risk alleles of both rs6502867 and rs2670660 had an odds ratio of 4.20 compared with individuals carrying a high-risk allele from only one signal.

[PMID 19727120 ] Fine-Mapping of Vitiligo Susceptibility Loci on Chromosomes 7 and 9 and Interactions with NLRP1 (NALP1)

[PMID 21149496] NLRP1 influences the systemic sclerosis phenotype: a new clue for the contribution of innate immunity in systemic sclerosis-related fibrosing alveolitis pathogenesis.

[PMID 21331694] Evaluation of NLRP1 gene polymorphisms in Vogt-Koyanagi-Harada disease.

[PMID 21976003] NLRP1 gene polymorphism influences gene transcription and is a risk factor for rheumatoid arthritis in han chinese.

[PMID 23773036] Association of NLRP1 genetic variants and mRNA overexpression with generalized vitiligo and disease activity in a Gujarat population.