rs587781276
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;TG) | 6.7 | CDH1-based gastric cancer risk |
(TG;TG) | 0 | common in clinvar |
Make rs587781276(-;-) |
Reference | GRCh38.p2 38.2/144 |
Chromosome | 16 |
Position | 68823526 |
Gene | CDH1 |
is a | snp |
is | mentioned by |
dbSNP | rs587781276 |
dbSNP (classic) | rs587781276 |
ClinGen | rs587781276 |
ebi | rs587781276 |
HLI | rs587781276 |
Exac | rs587781276 |
Gnomad | rs587781276 |
Varsome | rs587781276 |
LitVar | rs587781276 |
Map | rs587781276 |
PheGenI | rs587781276 |
Biobank | rs587781276 |
1000 genomes | rs587781276 |
hgdp | rs587781276 |
ensembl | rs587781276 |
geneview | rs587781276 |
scholar | rs587781276 |
rs587781276 | |
pharmgkb | rs587781276 |
gwascentral | rs587781276 |
openSNP | rs587781276 |
23andMe | rs587781276 |
SNPshot | rs587781276 |
SNPdbe | rs587781276 |
MSV3d | rs587781276 |
GWAS Ctlg | rs587781276 |
Merged from | Rs786204165 |
Max Magnitude | 6.7 |
Also known as c.2064_2065delTG, the minor allele is considered a pathogenic rare mutation for hereditary diffuse gastric cancer in ClinVar.
ClinVar | |
---|---|
Risk | rs587781276(-;-) |
Alt | rs587781276(-;-) |
Reference | Rs587781276(TG;TG) |
Significance | Pathogenic |
Disease | Hereditary cancer-predisposing syndrome Hereditary diffuse gastric cancer |
Variation | info |
Gene | CDH1 |
CLNDBN | Hereditary cancer-predisposing syndrome Hereditary diffuse gastric cancer |
Reversed | 0 |
HGVS | NC_000016.9:g.68857429_68857430delTG |
CLNSRC | |
CLNACC | RCV000128928.2, RCV000168178.1, |