rs376459828
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;G) | 5 | Familial Hypercholesterolemia |
(G;G) | 0 | common in clinvar |
(G;T) | 5 | Familial Hypercholesterolemia |
Make rs376459828(T;T) |
Reference | GRCh38.p2 38.2/147 |
Chromosome | 19 |
Position | 11105496 |
Gene | LDLR |
is a | snp |
is | mentioned by |
dbSNP | rs376459828 |
dbSNP (classic) | rs376459828 |
ClinGen | rs376459828 |
ebi | rs376459828 |
HLI | rs376459828 |
Exac | rs376459828 |
Gnomad | rs376459828 |
Varsome | rs376459828 |
LitVar | rs376459828 |
Map | rs376459828 |
PheGenI | rs376459828 |
Biobank | rs376459828 |
1000 genomes | rs376459828 |
hgdp | rs376459828 |
ensembl | rs376459828 |
geneview | rs376459828 |
scholar | rs376459828 |
rs376459828 | |
pharmgkb | rs376459828 |
gwascentral | rs376459828 |
openSNP | rs376459828 |
23andMe | rs376459828 |
SNPshot | rs376459828 |
SNPdbe | rs376459828 |
MSV3d | rs376459828 |
GWAS Ctlg | rs376459828 |
Max Magnitude | 5 |
aka c.590G>A, p.Cys197Tyr or C197Y; also c.590G>T, p.Cys197Phe or C197F
reported in ClinVar as pathogenic for familial hypercholesterolemia and therefore increased risk for coronary artery disease
ClinVar | |
---|---|
Risk | rs376459828(A;A) rs376459828(T;T) |
Alt | rs376459828(A;A) rs376459828(T;T) |
Reference | Rs376459828(G;G) |
Significance | Probable-Pathogenic |
Disease | Familial hypercholesterolemia |
Variation | info |
Gene | LDLR |
CLNDBN | Familial hypercholesterolemia |
Reversed | 0 |
HGVS | NC_000019.9:g.11216172G>A; NC_000019.9:g.11216172G>T |
CLNSRC | LDLR @ LOVD UniProtKB (protein) |
CLNACC | RCV000237811.2, RCV000238173.2, |