rs28359178
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(G;G) | 0 |
Make rs28359178(A;A) |
Make rs28359178(A;G) |
Reference | GRCh38.p7 38.3/150 |
Chromosome | MT |
Position | 13708 |
Gene | ND5 |
is a | snp |
is | mentioned by |
dbSNP | rs28359178 |
dbSNP (classic) | rs28359178 |
ClinGen | rs28359178 |
ebi | rs28359178 |
HLI | rs28359178 |
Exac | rs28359178 |
Gnomad | rs28359178 |
Varsome | rs28359178 |
LitVar | rs28359178 |
Map | rs28359178 |
PheGenI | rs28359178 |
Biobank | rs28359178 |
1000 genomes | rs28359178 |
hgdp | rs28359178 |
ensembl | rs28359178 |
geneview | rs28359178 |
scholar | rs28359178 |
rs28359178 | |
pharmgkb | rs28359178 |
gwascentral | rs28359178 |
openSNP | rs28359178 |
23andMe | rs28359178 |
SNPshot | rs28359178 |
SNPdbe | rs28359178 |
MSV3d | rs28359178 |
GWAS Ctlg | rs28359178 |
GMAF | 0.07103 |
Max Magnitude | 0 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
[PMID 19387457] Association of UCP2 -866 G/A polymorphism with chronic inflammatory diseases
Haplogroup SNP | |
---|---|
Alt. Name(s) | G13708A |
Source(s) | None specified |
Tree | PhyloTree build 16 |
Clade Haplogroup |
No Clade Haplogroup |
Ancestral Haplogroup |
Haplogroup H2a (mtDNA) |
Derived Haplogroup |
Haplogroup H2a5 (mtDNA) |
Ancestral Allele | G |
Derived Allele | A |
ClinVar | |
---|---|
Risk | rs28359178(A;A) |
Alt | rs28359178(A;A) |
Reference | Rs28359178(G;G) |
Significance | Other |
Disease | Leber's optic atrophy |
Variation | info |
Gene | ND5 |
CLNDBN | Leber's optic atrophy |
Reversed | 0 |
HGVS | NC_012920.1:m.13708G>A |
CLNSRC | OMIM Allelic Variant |
CLNACC | RCV000010336.4, |