rs273899692
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;CT) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(AT;CT) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(CT;CT) | 0 | common in clinvar |
Make rs273899692(CT;TA) |
Make rs273899692(TA;TA) |
Reference | GRCh38 38.1/142 |
Chromosome | 17 |
Position | 43092535 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs273899692 |
dbSNP (classic) | rs273899692 |
ClinGen | rs273899692 |
ebi | rs273899692 |
HLI | rs273899692 |
Exac | rs273899692 |
Gnomad | rs273899692 |
Varsome | rs273899692 |
LitVar | rs273899692 |
Map | rs273899692 |
PheGenI | rs273899692 |
Biobank | rs273899692 |
1000 genomes | rs273899692 |
hgdp | rs273899692 |
ensembl | rs273899692 |
geneview | rs273899692 |
scholar | rs273899692 |
rs273899692 | |
pharmgkb | rs273899692 |
gwascentral | rs273899692 |
openSNP | rs273899692 |
23andMe | rs273899692 |
SNPshot | rs273899692 |
SNPdbe | rs273899692 |
MSV3d | rs273899692 |
GWAS Ctlg | rs273899692 |
Max Magnitude | 6 |
rs273899692, also known as L999X, c.2995_2996delCTinsTA and p.Leu999Ter, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | rs273899692(TA;TA) |
Alt | rs273899692(TA;TA) |
Reference | Rs273899692(CT;CT) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer Familial cancer of breast Hereditary cancer-predisposing syndrome |
Variation | info |
Gene | BRCA1 |
CLNDBN | Breast-ovarian cancer, familial 1 Familial cancer of breast Hereditary cancer-predisposing syndrome |
Reversed | 1 |
HGVS | NC_000017.10:g.41244552_41244553delAGinsTA |
CLNSRC | ClinVar |
CLNACC | RCV000111976.3, RCV000159910.1, RCV000164626.2, |