rs2234978

Orientation

plus

Stabilized

plus

Geno	Mag	Summary
(T;T)	0	common in clinvar

Make rs2234978(C;C)

Make rs2234978(C;T)

Reference

GRCh38 38.1/142

Chromosome

10

Position

89012072

Gene

FAS

is a	snp
is	mentioned by
dbSNP	rs2234978
dbSNP (classic)	rs2234978
ClinGen	rs2234978
ebi	rs2234978
HLI	rs2234978
Exac	rs2234978
Gnomad	rs2234978
Varsome	rs2234978
LitVar	rs2234978
Map	rs2234978
PheGenI	rs2234978
Biobank	rs2234978
1000 genomes	rs2234978
hgdp	rs2234978
ensembl	rs2234978
geneview	rs2234978
scholar	rs2234978
google	rs2234978
pharmgkb	rs2234978
gwascentral	rs2234978
openSNP	rs2234978
23andMe	rs2234978
SNPshot	rs2234978
SNPdbe	rs2234978
MSV3d	rs2234978
GWAS Ctlg	rs2234978

GMAF

0.236

Max Magnitude

0

?	(C;C) (C;T) (T;T)	28

GWAS snp
PMID	[PMID 20694011]
Trait
Title	Association of IFIH1 and other autoimmunity risk alleles with selective IgA deficiency
Risk Allele	A
P-val	0.000006
Odds Ratio	1.32 [1.16-1.50]

[PMID 19669200] Analysis of single nucleotide polymorphisms in the FAS and CTLA-4 genes of peripheral T-cell lymphomas.

[PMID 20813889] Genetic variation in the FAS gene and associations with acute lung injury.

[PMID 20959405] The IFNG (IFN-gamma) genotype predicts cytogenetic and molecular response to imatinib therapy in chronic myeloid leukemia.

[PMID 23378343] MicroRNA-Related Genetic Variants Associated with Clinical Outcomes in Early Stage Non-Small Cell Lung Cancer Patients

ClinVar
Risk	rs2234978(C;C)
Alt	rs2234978(C;C)
Reference	Rs2234978(T;T)
Significance	Non-pathogenic
Disease	not specified Autoimmune lymphoproliferative syndrome
Variation	info
Gene	FAS
CLNDBN	not specified Autoimmune lymphoproliferative syndrome
Reversed	0
HGVS	NC_000010.10:g.90771829T>C
CLNSRC
CLNACC	RCV000244361.1, RCV000284596.1,