rs17079534

Orientation

plus

Stabilized

plus

Geno	Mag	Summary
(A;A)	2.5	Increased odds of relapse in treated childhood ALL patients
(A;G)	2	Increased odds of relapse in treated childhood ALL patients
(G;G)	0	common/normal

Reference

GRCh38 38.1/141

Chromosome

3

Position

39805581

is a	snp
is	mentioned by
dbSNP	rs17079534
dbSNP (classic)	rs17079534
ClinGen	rs17079534
ebi	rs17079534
HLI	rs17079534
Exac	rs17079534
Gnomad	rs17079534
Varsome	rs17079534
LitVar	rs17079534
Map	rs17079534
PheGenI	rs17079534
Biobank	rs17079534
1000 genomes	rs17079534
hgdp	rs17079534
ensembl	rs17079534
geneview	rs17079534
scholar	rs17079534
google	rs17079534
pharmgkb	rs17079534
gwascentral	rs17079534
openSNP	rs17079534
23andMe	rs17079534
SNPshot	rs17079534
SNPdbe	rs17079534
MSV3d	rs17079534
GWAS Ctlg	rs17079534

GMAF

0.0202

Max Magnitude

2.5

[PMID 23007406] Genome-wide association study identifies germline polymorphisms associated with relapse of childhood acute lymphoblastic leukemia. Each rs17079534(A) allele increases odds of relapse by 4.07 (CI:2.4-6.87, adjusted p=2 × 10e−4) based on a study of 2,500 childhood acute lymphoblastic leukemia patients.

?	(A;A) (A;G) (G;G)	28

GWAS snp
PMID	[PMID 23007406]
Trait	Acute lymphoblastic leukemia (childhood)
Title	Genome-wide association study identifies germline polymorphisms associated with relapse of childhood acute lymphoblastic leukemia.
Risk Allele	A
P-val	2E-7
Odds Ratio	4.07 [2.40-6.87]