rs145588689
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 8 | Aicardi-Goutieres syndrome? (pathogenicity unclear) |
(C;G) | 3 | Carrier for Aicardi-Goutieres syndrome mutation |
(G;G) | 0 | common in clinvar |
Reference | GRCh38 38.1/142 |
Chromosome | 1 |
Position | 154602065 |
Gene | ADAR |
is a | snp |
is | mentioned by |
dbSNP | rs145588689 |
dbSNP (classic) | rs145588689 |
ClinGen | rs145588689 |
ebi | rs145588689 |
HLI | rs145588689 |
Exac | rs145588689 |
Gnomad | rs145588689 |
Varsome | rs145588689 |
LitVar | rs145588689 |
Map | rs145588689 |
PheGenI | rs145588689 |
Biobank | rs145588689 |
1000 genomes | rs145588689 |
hgdp | rs145588689 |
ensembl | rs145588689 |
geneview | rs145588689 |
scholar | rs145588689 |
rs145588689 | |
pharmgkb | rs145588689 |
gwascentral | rs145588689 |
openSNP | rs145588689 |
23andMe | rs145588689 |
SNPshot | rs145588689 |
SNPdbe | rs145588689 |
MSV3d | rs145588689 |
GWAS Ctlg | rs145588689 |
Max Magnitude | 8 |
rs145588689, also known as c.577C>G, p.Pro193Ala and P193A, represents a rare variant in the ADAR gene on chromosome 1.
Inherited recessively, the rs145588689(C) allele - as designated in dbSNP orientation - is considered by BabySeq and most (but not all) submitters to ClinVar as likely to be pathogenic for Aicardi-Goutieres syndrome. It is also considered pathogenic by OMIM, but considered as a variant of uncertain significance by several other databases, including the ADAR gene LOVD.
ClinVar | |
---|---|
Risk | Rs145588689(C;C) rs145588689(T;T) |
Alt | Rs145588689(C;C) rs145588689(T;T) |
Reference | Rs145588689(G;G) |
Significance | Other |
Disease | Aicardi-goutieres syndrome 6 not provided Symmetrical dyschromatosis of extremities Aicardi Goutieres syndrome |
Variation | info |
Gene | ADAR |
CLNDBN | Aicardi-goutieres syndrome 6 not provided Symmetrical dyschromatosis of extremities Aicardi Goutieres syndrome |
Reversed | 0 |
HGVS | NC_000001.10:g.154574541G>C |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000114336.7, RCV000255775.2, RCV000288094.1, RCV000352411.1, |