rs137853966
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;-) | 4 | dominant mutation leading to Familial Hypercholesterolemia |
(-;G) | 5 | Familial Hypercholesterolemia |
(G;G) | 0 | common in clinvar |
Reference | GRCh38 38.1/141 |
Chromosome | 19 |
Position | 11105559 |
Gene | LDLR |
is a | snp |
is | mentioned by |
dbSNP | rs137853966 |
dbSNP (classic) | rs137853966 |
ClinGen | rs137853966 |
ebi | rs137853966 |
HLI | rs137853966 |
Exac | rs137853966 |
Gnomad | rs137853966 |
Varsome | rs137853966 |
LitVar | rs137853966 |
Map | rs137853966 |
PheGenI | rs137853966 |
Biobank | rs137853966 |
1000 genomes | rs137853966 |
hgdp | rs137853966 |
ensembl | rs137853966 |
geneview | rs137853966 |
scholar | rs137853966 |
rs137853966 | |
pharmgkb | rs137853966 |
gwascentral | rs137853966 |
openSNP | rs137853966 |
23andMe | rs137853966 |
SNPshot | rs137853966 |
SNPdbe | rs137853966 |
MSV3d | rs137853966 |
GWAS Ctlg | rs137853966 |
Max Magnitude | 5 |
The - (deletion) allele of this SNP in the low density lipoprotein receptor LDLR gene is a dominant mutation that causes familial hypercholesterolemia. [PMID 7649546]
ClinVar | |
---|---|
Risk | Rs137853966(-;-) |
Alt | Rs137853966(-;-) |
Reference | Rs137853966(G;G) |
Significance | Other |
Disease | not provided Familial hypercholesterolemia |
Variation | info |
Gene | LDLR |
CLNDBN | not provided Familial hypercholesterolemia |
Reversed | 0 |
HGVS | NC_000019.9:g.11216235delG |
CLNSRC | LDLR @ LOVD |
CLNACC | RCV000058918.1, RCV000237824.1, |
[PMID 19602640] The ClinSeq Project: piloting large-scale genome sequencing for research in genomic medicine.