rs12621278

Orientation

plus

Stabilized

plus

Geno	Mag	Summary
(A;A)	0	common in complete genomics

Make rs12621278(A;G)

Make rs12621278(G;G)

Reference

GRCh38 38.1/141

Chromosome

2

Position

172446825

Gene

ITGA6

is a	snp
is	mentioned by
dbSNP	rs12621278
dbSNP (classic)	rs12621278
ClinGen	rs12621278
ebi	rs12621278
HLI	rs12621278
Exac	rs12621278
Gnomad	rs12621278
Varsome	rs12621278
LitVar	rs12621278
Map	rs12621278
PheGenI	rs12621278
Biobank	rs12621278
1000 genomes	rs12621278
hgdp	rs12621278
ensembl	rs12621278
geneview	rs12621278
scholar	rs12621278
google	rs12621278
pharmgkb	rs12621278
gwascentral	rs12621278
openSNP	rs12621278
23andMe	rs12621278
SNPshot	rs12621278
SNPdbe	rs12621278
MSV3d	rs12621278
GWAS Ctlg	rs12621278

GMAF

0.08953

Max Magnitude

0

?	(A;A) (A;G) (G;G)	28

GWAS snp
PMID	[PMID 19767753]
Trait	Prostate cancer
Title	Identification of seven new prostate cancer susceptibility loci through a genome-wide association study
Risk Allele	G
P-val	9E-23
Odds Ratio	1.33 [1.25-1.43]

[PMID 20651075] Prostate Cancer Susceptibility Variants Confer Increased Risk of Disease Progression

According to a 23andMe report, the rs12621278(A;A) genotype is associated with 2.4 times higher risk of progression of prostate cancer. [PMID 20651075]

[PMID 21820706] Prostate Cancer Risk Alleles and Their Associations With Other Malignancies

[PMID 21390317] Characterizing associations and SNP-environment interactions for GWAS-identified prostate cancer risk markers--results from BPC3.

[PMID 23405784] [Susceptibility to prostate cancer in Han Chinese: single nucleotide polymorphism analysis of 1 667 cases]

[PMID 23620269] Genetic variants in 2q31 and 5p15 are associated with aggressive benign prostatic hyperplasia in a Chinese population.