Rs6265
| is a | snp |
| is | mentioned by |
| dbSNP | rs6265 |
| nextbio | rs6265 |
| hapmap | rs6265 |
| 1000 genomes | rs6265 |
| hgdp | rs6265 |
| ensembl | rs6265 |
| gopubmed | rs6265 |
| scholar | rs6265 |
| rs6265 | |
| pharmgkb | rs6265 |
| gwascentral | rs6265 |
| openSNP | rs6265 |
| 23andMe | rs6265 |
| 23andMe all | rs6265 |
| SNP Nexus | |
| SNPshot | rs6265 |
| SNPdbe | rs6265 |
| MSV3d | rs6265 |
| Gene | BDNF |
| Chromosome | 11 |
| Orientation | minus |
| Position | 27679916 |
| Reference | GRCh37 37.1/131 |
| Max Magnitude | 2.5 |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 2.5 | introversion; depression resistant; impaired motor skills learning |
| (A;G) | 2.4 | impaired motor skills learning? |
| (G;G) | ? |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
[PMID 20042999] Met/A allele associated with introversion
The A allele may also be protective against depression when subjected to repeated defeat [PMID 17956738] g2b2mh blog
On a driving-based motor learning task subjects with this genotype showed greater error during short-term learning and poorer retention over 4 days, relative to subjects without the polymorphism. The presence of this BDNF polymorphism is associated with differences in brain motor system function, altered short-term plasticity, and greater error in short-term motor learning. [PMID 19745020]
Wired discusses the research as does spittoon.
[PMID 17293537] Alzheimer's disease risk for non ApoE4 carriers is affected by the heterozygous form of rs6265, as well as the diplotypes of rs6265, rs11030104, and rs2049045.
[PMID 18600033] Depressed patients who had (GA or AA) appeared to show a significantly increased risk of suicidal behaviour
[PMID 19209189] In 2 studies of British women, rs6265(A;A) women had a lower body mass index than rs6265(G) allele carriers, with the difference being -0.57-0.911 kg/m(2), depending on the study.
| Neighbor | rs8192466 |
| Distance | 191 |
[PMID 19388013] BDNF, relative preference, and reward circuitry responses to emotional communication
| GWAS snp | |
|---|---|
| PMID | [PMID 19079260] |
| Trait | Body mass index |
| Title | Genome-wide association yields new sequence variants at seven loci that associate with measures of obesity |
| Risk Allele | G |
| P-val | 5E-10 |
| Odds Ratio | 4.58 [3.07-6.09] % SD |
[PMID 19461660] No association between the brain-derived neurotrophic factor gene and panic disorder in Japanese population
[PMID 19530966] Development of a new genotyping assay for detection of the BDNF Val66Met polymorphism using melting-curve analysis
[PMID 19603419] Meta-analysis of brain-derived neurotrophic factor p.Val66Met in adult ADHD in four European populations
[PMID 20943059] Attention-deficit hyperactivity disorder and intellectual disability: a study of association with brain-derived neurotrophic factor gene polymorphisms
[PMID 15940292] A common variant of the latrophilin 3 gene, LPHN3, confers susceptibility to ADHD and predicts effectiveness of stimulant medication
[PMID 18286632] Association study of brain-derived neurotrophic factor (BDNF) and LIN-7 homolog (LIN-7) genes with adult attention-deficit/hyperactivity disorder
[PMID 19699537] Family-based association study between brain-derived neurotrophic factor gene and major depressive disorder of Chinese descent
[PMID 19925205] Ebbinghaus Revisited: Influences of the BDNF Val66Met Polymorphism on Backward Serial Recall Are Modulated by Human Aging
| PharmGKB | PA164857051 |
| Name | |
| Annotation | This nonsynonymous variant (G/A) in an exon in BDNF gene was associated with major depressive disorder in a study of 264 controls and 272 Mexican Americans with major depressive disorder. (OR= 1.66; p value=0.009; risk allele=G) |
| Gene | BDNF |
| Featue | |
| Evidence | PubMed ID:19414708 |
| Drugs | |
| Diseases | Depression, Depressive Disorder, Major |
| Curation Level | Curated |
[PMID 20033742] Genetic association of the interaction between the BDNF and GSK3B genes and major depressive disorder in a Chinese population
[PMID 19895626] The effect of BDNF gene variants on asthma in German children
[PMID 20087404] Genetic variants in the BDNF gene and therapeutic response to risperidone in schizophrenia patients: a pharmacogenetic study
[PMID 20147969] Non-synonymous single-nucleotide polymorphisms associated with blood pressure and hypertension
[PMID 20418890] Genome-wide meta-analyses identify multiple loci associated with smoking behavior
[PMID 20682308] The combined effects of the BDNF and GSK3B genes modulate the relationship between negative life events and major depressive disorder
[PMID 20456319] Association of polymorphisms in the BDNF, DRD1 and DRD3 genes with tobacco smoking in schizophrenia
[PMID 20702703] The Role of the BDNF Val66Met Polymorphism for the Synchronization of Error-Specific Neural Networks
[PMID 20959432] BDNF and CGRP interaction: Implications in migraine susceptibility
[PMID 20966902] Genome-Wide Association Study of Anthropometric Traits and Evidence of Interactions With Age and Study Year in Filipino Women
| PharmGKB | PA162364070 |
| Name | BDNF:Val66Met |
| Annotation | In DNA from frontal-cortex brain tissue of a group of Schizophrenia, Bipolar Disorder and Control individuals, this SNP was found to be associated with methylation at CpG sites surrounding the gene. CC genotype was associated with a higher level of methylation. |
| Gene | BDNF |
| Featue | |
| Evidence | PubMed ID:18319075 |
| Drugs | |
| Diseases | |
| Curation Level | Curated |
| PharmGKB | PA164740154 |
| Name | |
| Annotation | GWAS results: Genome-wide association yields new sequence variants at seven loci that associate with measures of obesity. (Initial Sample Size: 80,969 individuals; Replication Sample Size: 11,036 individuals); (Region: 11p14.1; Reported Gene(s): BDNF; Risk Allele: rs6265-G); (p-value= 0.0000000005).This variant is associated with Body mass index. |
| Gene | BDNF |
| Featue | |
| Evidence | PubMed ID:19079260; Web Resource:http://www.genome.gov/gwastudies/ |
| Drugs | |
| Diseases | |
| Curation Level | Non-Curated |
| PharmGKB | PA164740174 |
| Name | |
| Annotation | GWAS results: Genome-wide association yields new sequence variants at seven loci that associate with measures of obesity. (Initial Sample Size: 80,969 individuals; Replication Sample Size: 11,036 individuals); (Region: 11p14.1; Reported Gene(s): BDNF; Risk Allele: rs6265-G); (p-value= 0.0000002).This variant is associated with Weight. |
| Gene | BDNF |
| Featue | |
| Evidence | PubMed ID:19079260; Web Resource:http://www.genome.gov/gwastudies/ |
| Drugs | |
| Diseases | |
| Curation Level | Non-Curated |
[PMID 21188787] Brain-derived neurotrophic factor gene polymorphisms: influence on treatment response phenotypes of major depressive disorder
[PMID 20843981] Associations of six single nucleotide polymorphisms in obesity-related genes with BMI and risk of obesity in Chinese children
[PMID 21300947] The Brain-Derived Neurotrophic Factor Val66Met Polymorphism and Prediction of Neural Risk for Alzheimer Disease
[PMID 21723144] Genetic variation in BDNF is associated with allergic asthma and allergic rhinitis in an ethnic Chinese population in Singapore
[PMID 21796141] Computed tomography analysis of the association between the SH2B1 rs7498665 single-nucleotide polymorphism and visceral fat area
[PMID 21527513] Influence of physical inactivity on associations between single nucleotide polymorphisms and genetic predisposition to childhood obesity
[PMID 21889574] Association analysis between the Val66Met polymorphism in the brain-derived neurotrophic factor (BDNF) gene and treatment response to venlafaxine XR in generalized anxiety disorder
[PMID 21980924] BDNF Val66Met and Cognition: All, None, or Some? A Meta-Analysis of the Genetic Association
[PMID 22033217] Interaction between BDNF Val66Met and childhood stressful life events is associated to affective memory bias in men but not women
[PMID 22085476] Evidence of associations between bipolar disorder and the brain-derived neurotrophic factor (BDNF) gene
[PMID 22127997] No association of brain-derived neurotrophic factor Val66Met polymorphism with anorexia nervosa in Japanese
[PMID 22173577] Recapitulation of the Association of the Val66Met Polymorphism of BDNF Gene With BMI in Koreans
[PMID 22188054] Polymorphisms in the Brain Derived Neurotrophic Factor (BDNF) Gene Influence Memory and Processing Speed One Month After Brain Injury
[PMID 22194877] Brain Derived Neurotrophic Factor (BDNF) Expression Is Regulated by MicroRNAs miR-26a and miR-26b Allele-Specific Binding
[PMID 21641949] Functional variants of the genes involved in neurodevelopment and susceptibility to schizophrenia in an Armenian population
[PMID 21880305] The brain-derived neurotrophic factor is associated with alcohol dependence-related depression and antidepressant response
[PMID 22548711] Association of BDNF Gene Polymorphism with Bipolar Disorders in Han Chinese Population