Rs420259

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is asnp
is mentioned by
dbSNPrs420259
hapmaprs420259
hgdprs420259
ensemblrs420259
gopubmedrs420259
scholarrs420259
googlers420259
pharmgkbrs420259
hgvbaseg2prs420259
medrefsnprs420259
23andMers420259
SNP Nexus

GenePALB2
Chromosome16
Orientationminus
Position23541526
GenotypeEffect
rs420259(T;T)2x risk
rs420259(C;T)2x risk
rs420259(C;C)normal


Genotypes Magnitude Summary
Rs420259(C;C) normal
Rs420259(C;T) 2x risk
Rs420259(T;T) 2x risk

Linked to bipolar disorder in one of the most comprehensive studies to date (2007).

Risk allele with reference to dbSNP orientation is reported to be (T), with either one or two copies leading to an odds ratio of 2 (CI 1.6-2.7). [PMID 17554300]

GWAS
SNP rs420259
PubMedID [PMID 17554300]
Condition Bipolar disorder
Gene PALB2,NDUFAB1,DCTN5
Risk Allele T
pValue 6.00E-008
OR 2.08
95% CI 1.60-2.71
? (C;C) (C;T) (T;T)
Related to MAJOR AFFECTIVE DISORDER 4; MAFD4 according to omim 611247. See also


PharmGKBPA162356654
Name
AnnotationGWAS Results: Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls (Initial Sample Size: 1,868 cases, 2,938 controls; Replication Sample Size: NR; Risk Allele: rs420259-A). This variant is associated with bipolar disorder.
GenePALB2
Featue
EvidencePubMed ID:17554300; Web Resource:http://www.genome.gov/gwastudies/
Drugs
DiseasesBipolar Disorder
Curation LevelNon-Curated