Rs3849942

From SNPedia

Jump to: navigation, search
is asnp
is mentioned by
dbSNPrs3849942
hapmaprs3849942
hgdprs3849942
ensemblrs3849942
gopubmedrs3849942
scholarrs3849942
googlers3849942
pharmgkbrs3849942
hgvbaseg2prs3849942
medrefsnprs3849942
23andMers3849942
SNP Nexus

Chromosome9
Orientationminus
Position27533280
GenotypeEffect
rs3849942(A;A)>1.15x increased risk for ALS
rs3849942(A;G)1.15x increased risk for ALS
rs3849942(G;G)normal


Genotypes Magnitude Summary
Rs3849942(A;A) >1.15x increased risk for ALS
Rs3849942(A;G) 1.15x increased risk for ALS
Rs3849942(G;G) normal

rs3849942 is one of 2 SNPs from the ch 9p21.2 region associated in a large GWAS study with ALS risk, the other SNP being rs2814707.

The odds ratio for the minor rs3849942(A) allele was 1.15 (p=1.01x10e-8).[PMID 19734901]

? (A;A) (A;G) (G;G)
PharmGKBPA162928830
Name
AnnotationThis variant is significantly associated with the efficacy of anti-TNF treatment in rheumatoid arthritis (Adjusted P-value: 0.000005; OR: 5.0 (1.7, 15.8)). The study is a genome-wide association study using the Illumina HapMap300 SNP chip on 89 RA patients prospectively followed after beginning of anti-TNF therapy.
Gene-
Featue
EvidencePubMed ID:18615156
Drugsadalimumab, etanercept, infliximab
DiseasesArthritis, Rheumatoid
Curation LevelCurated