Rs1893217

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is asnp
is mentioned by
dbSNPrs1893217
hapmaprs1893217
hgdprs1893217
ensemblrs1893217
gopubmedrs1893217
scholarrs1893217
googlers1893217
pharmgkbrs1893217
hgvbaseg2prs1893217
medrefsnprs1893217
23andMers1893217
SNP Nexus

GenePTPN2
Chromosome18
Orientationminus
Position12799339
GenotypeEffect
rs1893217(C;C)*?
rs1893217(C;T)*?
rs1893217(T;T)*?


linked to Crohn's disease and type-1 diabetes

? (C;C) (C;T) (T;T)
GWAS snp
PMID [PMID 19430480]
Trait Type 1 diabetes
Title Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes
Risk Allele
P-val 4E-15
Odds Ratio NR NR


[PMID 19951419] Confirmation of the genetic association of CTLA4 and PTPN22 with ANCA-associated vasculitis

[PMID 20222910] Susceptibility loci reported in genome-wide association studies are associated with Crohn's disease in Canadian children