rs7422339

Merged into

rs1047891

Orientation

plus

Stabilized

plus

Make rs7422339(A;A)

Make rs7422339(A;C)

Make rs7422339(C;C)

Reference

GRCh38 38.1/141

Chromosome

2

Position

210675783

Gene

CPS1

is a	snp
is	mentioned by
dbSNP	rs7422339
dbSNP (classic)	rs7422339
ClinGen	rs7422339
ebi	rs7422339
HLI	rs7422339
Exac	rs7422339
Gnomad	rs7422339
Varsome	rs7422339
LitVar	rs7422339
Map	rs7422339
PheGenI	rs7422339
Biobank	rs7422339
1000 genomes	rs7422339
hgdp	rs7422339
ensembl	rs7422339
geneview	rs7422339
scholar	rs7422339
google	rs7422339
pharmgkb	rs7422339
gwascentral	rs7422339
openSNP	rs7422339
23andMe	rs7422339
SNPshot	rs7422339
SNPdbe	rs7422339
MSV3d	rs7422339
GWAS Ctlg	rs7422339

Status

Merged into rs1047891

Max Magnitude

0

?

(A;A) (A;C) (C;C)

28

GWAS snp
PMID	[PMID 20031577 ]
Trait	Fibrinogen
Title	Novel Loci, Including Those Related to Crohn Disease, Psoriasis, and Inflammation Identified in a Genome-Wide Association Study of Fibrinogen in 17,686 Women: The Women's Genome Health Study
Risk Allele	A
P-val	9E-9
Odds Ratio	4.84 [NR] mg/dl decrease

[PMID 20154341 ] Genome-wide association study of homocysteine levels in Filipinos provides evidence for CPS1 n women and a stronger MTHFR effect in young adults

GWAS snp
PMID	[PMID 20383146 ]
Trait	Chronic kidney disease
Title	New loci associated with kidney function and chronic kidney disease
Risk Allele	A
P-val	1E-15
Odds Ratio	0.01 [0.005-0.013] ml/min/1.73 m2 decrease

GWAS snp
PMID	[PMID 23824729 ]
Trait	Homocysteine levels
Title	Common genetic loci influencing plasma homocysteine concentrations and their effect on risk of coronary artery disease.
Risk Allele	A
P-val	5E-27
Odds Ratio	.09 [0.071-0.102] unit increase

GWAS snp
PMID	[PMID 24625756 ]
Trait	Serum metabolite levels
Title	Genetic determinants influencing human serum metabolome among African Americans.
Risk Allele	A
P-val	4E-12
Odds Ratio	.10 [NR] unit increase