rs2056626
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs2056626(G;G) |
| Make rs2056626(G;T) |
| Make rs2056626(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 1 |
| Position | 167451188 |
| Gene | CD247, LOC101928512 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2056626 |
| dbSNP (classic) | rs2056626 |
| ClinGen | rs2056626 |
| ebi | rs2056626 |
| HLI | rs2056626 |
| Exac | rs2056626 |
| Gnomad | rs2056626 |
| Varsome | rs2056626 |
| LitVar | rs2056626 |
| Map | rs2056626 |
| PheGenI | rs2056626 |
| Biobank | rs2056626 |
| 1000 genomes | rs2056626 |
| hgdp | rs2056626 |
| ensembl | rs2056626 |
| geneview | rs2056626 |
| scholar | rs2056626 |
| rs2056626 | |
| pharmgkb | rs2056626 |
| gwascentral | rs2056626 |
| openSNP | rs2056626 |
| 23andMe | rs2056626 |
| SNPshot | rs2056626 |
| SNPdbe | rs2056626 |
| MSV3d | rs2056626 |
| GWAS Ctlg | rs2056626 |
| GMAF | 0.2314 |
| Max Magnitude | 0 |
| ? | (G;G) (G;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 20383147 ]
|
| Trait | Systemic sclerosis |
| Title | Genome-wide association study of systemic sclerosis identifies CD247 as a new susceptibility locus |
| Risk Allele | |
| P-val | 3E-9 |
| Odds Ratio | 1.16 [1.11-1.23] |
| GWAS snp | |
|---|---|
| PMID | [PMID 21779181]
|
| Trait | |
| Title | Identification of novel genetic markers associated with clinical phenotypes of systemic sclerosis through a genome-wide association strategy. |
| Risk Allele | |
| P-val | 0.000003 |
| Odds Ratio | 1.2300 [1.12-1.33] |
| GWAS snp | |
|---|---|
| PMID | [PMID 21750679]
|
| Trait | |
| Title | Genome-wide scan identifies TNIP1, PSORS1C1, and RHOB as novel risk loci for systemic sclerosis. |
| Risk Allele | T |
| P-val | 0.000001 |
| Odds Ratio | 1.2000 [1.12-1.30] |
[PMID 22440820] IRF5 polymorphism predicts prognosis in patients with systemic sclerosis
[PMID 23861880] Association of CD247 Polymorphisms with Rheumatoid Arthritis: A Replication Study and a Meta-Analysis
