rs1558744
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs1558744(A;A) |
| Make rs1558744(A;G) |
| Make rs1558744(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 12 |
| Position | 68110812 |
| Gene | LOC107984526 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs1558744 |
| dbSNP (classic) | rs1558744 |
| ClinGen | rs1558744 |
| ebi | rs1558744 |
| HLI | rs1558744 |
| Exac | rs1558744 |
| Gnomad | rs1558744 |
| Varsome | rs1558744 |
| LitVar | rs1558744 |
| Map | rs1558744 |
| PheGenI | rs1558744 |
| Biobank | rs1558744 |
| 1000 genomes | rs1558744 |
| hgdp | rs1558744 |
| ensembl | rs1558744 |
| geneview | rs1558744 |
| scholar | rs1558744 |
| rs1558744 | |
| pharmgkb | rs1558744 |
| gwascentral | rs1558744 |
| openSNP | rs1558744 |
| 23andMe | rs1558744 |
| SNPshot | rs1558744 |
| SNPdbe | rs1558744 |
| MSV3d | rs1558744 |
| GWAS Ctlg | rs1558744 |
| GMAF | 0.3292 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
A genome-wide association study using DNA samples from 1,052 individuals with ulcerative colitis and preexisting data from 2,571 controls, all of European ancestry, concluded that this SNP and several others were associated with altered risk for the disease.[PMID 19122664
]
| GWAS snp | |
|---|---|
| PMID | [PMID 20228799]
|
| Trait | Ulcerative colitis |
| Title | Genome-wide association identifies multiple ulcerative colitis susceptibility loci |
| Risk Allele | A |
| P-val | 4E-12 |
| Odds Ratio | 1.16 [NR] |
[PMID 21304977] An investigation of genome-wide studies reported susceptibility loci for ulcerative colitis shows limited replication in north Indians.
