rs11860650
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs11860650(C;C) |
| Make rs11860650(C;T) |
| Make rs11860650(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 16 |
| Position | 31315385 |
| Gene | ITGAM |
| is a | snp |
| is | mentioned by |
| dbSNP | rs11860650 |
| dbSNP (classic) | rs11860650 |
| ClinGen | rs11860650 |
| ebi | rs11860650 |
| HLI | rs11860650 |
| Exac | rs11860650 |
| Gnomad | rs11860650 |
| Varsome | rs11860650 |
| LitVar | rs11860650 |
| Map | rs11860650 |
| PheGenI | rs11860650 |
| Biobank | rs11860650 |
| 1000 genomes | rs11860650 |
| hgdp | rs11860650 |
| ensembl | rs11860650 |
| geneview | rs11860650 |
| scholar | rs11860650 |
| rs11860650 | |
| pharmgkb | rs11860650 |
| gwascentral | rs11860650 |
| openSNP | rs11860650 |
| 23andMe | rs11860650 |
| SNPshot | rs11860650 |
| SNPdbe | rs11860650 |
| MSV3d | rs11860650 |
| GWAS Ctlg | rs11860650 |
| GMAF | 0.107 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
association with lupus [PMID 19838195
]
[PMID 19129174] Evaluation of imputation-based association in and around the integrin-alpha-M (ITGAM) gene and replication of robust association between a non-synonymous functional variant within ITGAM and systemic lupus erythematosus (SLE).
| GWAS snp | |
|---|---|
| PMID | [PMID 23740937]
|
| Trait | Systemic lupus erythematosus and Systemic sclerosis |
| Title | A systemic sclerosis and systemic lupus erythematosus pan-meta-GWAS reveals new shared susceptibility loci. |
| Risk Allele | |
| P-val | 1E-10 |
| Odds Ratio | 1.32 [NR] |
