Rs9469220

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is asnp
is mentioned by
dbSNPrs9469220
hapmaprs9469220
hgdprs9469220
ensemblrs9469220
gopubmedrs9469220
scholarrs9469220
googlers9469220
pharmgkbrs9469220
hgvbaseg2prs9469220
medrefsnprs9469220
23andMers9469220
SNP Nexus

Chromosome6
Orientationplus
Position32766287
GenotypeEffect
rs9469220(A;A)1.5x risk
rs9469220(A;G)1.1x risk
rs9469220(G;G)normal


Genotypes Magnitude Summary
Rs9469220(A;A) 1.5x risk
Rs9469220(A;G) 1.1x risk
Rs9469220(C;C) 00
Rs9469220(G;G) 00 normal
rs9469220 has been reported in a large study to be associated with Crohn's disease.

The risk allele (oriented to the dbSNP entry) is (A); the odds ratio associated with heterozygotes is 1.14 (CI 0.98-1.32), and for homozygotes, 1.52 (CI 1.28-1.79). [PMID 17554300]

? (A;A) (A;G) (G;G)
GWAS
SNP rs9469220
PubMedID [PMID 17554300]
Condition Crohn's disease
Gene NR
Risk Allele A
pValue 2.00E-006
OR 1.14
95% CI 0.98-1.32


PharmGKBPA162356660
Name
AnnotationGWAS Results: Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls (Initial Sample Size: 1,748 cases, 2,938 controls; Replication Sample Size: (see Parkes 2007); Risk Allele: rs9469220-A). This variant is associated with crohn's disease.
Gene-
Featue
EvidencePubMed ID:17554300; Web Resource:http://www.genome.gov/gwastudies/
Drugs
DiseasesCrohn Disease
Curation LevelNon-Curated