Rs4958847

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is asnp
is mentioned by
dbSNPrs4958847
hapmaprs4958847
hgdprs4958847
ensemblrs4958847
gopubmedrs4958847
scholarrs4958847
googlers4958847
pharmgkbrs4958847
hgvbaseg2prs4958847
medrefsnprs4958847
23andMers4958847
SNP Nexus

GeneIRGM
Chromosome5
Orientationplus
Position150219779
GenotypeEffect
rs4958847(A;A)2.6x increased risk for Crohn's disease
rs4958847(A;G)1.3x increased risk for Crohn's disease
rs4958847(G;G)normal


Genotypes Magnitude Summary
Rs4958847(A;A) 2.62.6 2.6x increased risk for Crohn's disease
Rs4958847(A;G) 1.31.3 1.3x increased risk for Crohn's disease
Rs4958847(G;G) 00 normal

rs4958847 is a SNP in the IRGM gene.

A study of 507 CD patients, 475 UC patients and 576 controls from New Zealand Caucasians found that rs4958847, a SNP in the IRGM gene, was associated specifically with ileal Crohn's disease but not with other forms of inflammatory bowel disease. The reported odds ratio was 1.767, CI: 1.224-2.558, p=0.0022.[PMID 18580884]

Another study, including 557 Crohn's disease (CD) patients, 425 ulcerative colitis (UC) patients, and 672 ethnically matched Spanish controls as well as a meta-analysis concluded that rs4958847(A) was associated with CD (p=2.78 x 10(-17), pooled odds ratio 1.31) and UC (p=0.014, pooled odds ratio 1.13).[PMID 19491842]

? (A;A) (A;G) (G;G)
Neighborrs1000113
Distance489


[PMID 19174780] Confirmation of multiple Crohn's disease susceptibility loci in a large Dutch-Belgian cohort

Related to INFLAMMATORY BOWEL DISEASE 19; IBD19 according to omim 612278. See also


Related to IMMUNITY-RELATED GTPase FAMILY, M; IRGM according to omim 608212. See also