Rs4678
From SNPedia
| is a | snp |
| is | mentioned by |
| dbSNP | rs4678 |
| hapmap | rs4678 |
| hgdp | rs4678 |
| ensembl | rs4678 |
| gopubmed | rs4678 |
| scholar | rs4678 |
| rs4678 | |
| pharmgkb | rs4678 |
| hgvbaseg2p | rs4678 |
| medrefsnp | rs4678 |
| 23andMe | rs4678 |
| SNP Nexus |
| Gene | VARS2L |
| Chromosome | 6 |
| Orientation | minus |
| Position | 31001919 |
| Genotype | Effect |
|---|---|
| rs4678(C;C)* | |
| rs4678(C;T)* | |
| rs4678(T;T)* |
A study of 855 rheumatoid arthritis patients concluded that rs4678 was one of only two SNPs representing an additional susceptibility gene - in addition to HLA-DRB1 - within the MHC region.[PMID 19116923]
There is some inconsistency in this SNP. The reference assembly considers it a A/G while RefSNP calls it a C/T.
| ? | (C;C) (C;T) (T;T) |
|---|---|
|
| |
