Rs3825932

From SNPedia
Jump to: navigation, search

Orientationplus
is asnp
is mentioned by
dbSNPrs3825932
PheGenIrs3825932
nextbiors3825932
hapmaprs3825932
1000 genomesrs3825932
hgdprs3825932
ensemblrs3825932
gopubmedrs3825932
geneviewrs3825932
scholarrs3825932
googlers3825932
pharmgkbrs3825932
gwascentralrs3825932
openSNPrs3825932
23andMers3825932
23andMe allrs3825932
SNP Nexus

SNPshotrs3825932
SNPdbers3825932
MSV3drs3825932
GeneCTSH
Chromosome15
Orientationplus
GMAF0.3701
Position78943104
ReferenceGRCh38 38.1/141
Max Magnitude
Make rs3825932(C;C)
Make rs3825932(C;T)
Make rs3825932(T;T)
? (C;C) (C;T) (T;T) 28
GWAS snp
PMID [PMID 18978792OA-icon.png]
Trait Type 1 diabetes
Title Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci
Risk Allele C
P-val 2.9999999999999998E-15
Odds Ratio 1.16 [1.10-1.22]
GWAS snp
PMID [PMID 19430480OA-icon.png]
Trait Type 1 diabetes
Title Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes
Risk Allele
P-val 8E-8
Odds Ratio NR NR
OMIM222100
DescDIABETES MELLITUS, INSULIN-DEPENDENT; IDDM
Variant
Relatedalso
[PMID 19073967OA-icon.png] Shared and distinct genetic variants in type 1 diabetes and celiac disease.


[PMID 20369022OA-icon.png] Candidate causal regulatory effects by integration of expression QTLs with complex trait genetic associations.


GET Evidence
rs3825932
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.382812
summary



[PMID 24982147] CTSH regulates β-cell function and disease progression in newly diagnosed type 1 diabetes patients