Rs3798220

From SNPedia
Jump to: navigation, search

is asnp
is mentioned by
dbSNPrs3798220
nextbiors3798220
hapmaprs3798220
1000 genomesrs3798220
hgdprs3798220
ensemblrs3798220
gopubmedrs3798220
scholarrs3798220
googlers3798220
pharmgkbrs3798220
gwascentralrs3798220
openSNPrs3798220
23andMers3798220
23andMe allrs3798220
SNP Nexus

SNPshotrs3798220
SNPdbers3798220
MSV3drs3798220
GeneLPA
Chromosome6
Orientationplus
Position160961137
ReferenceGRCh37 37.1/131
Max Magnitude2.1
Geno Mag Summary
(C;C) 2.1 2-3x higher risk for cardiovascular events, which can be lowered by aspirin
(C;T) 2 2-3x higher risk for cardiovascular events, which can be lowered by aspirin
(T;T) 0 normal
? (C;C) (C;T) (T;T) 28
rs3798220, also known as I4399M or Ile4399Met, is a SNP in the apolipoprotein(A) LPA gene that has been reported to be associated with elevated plasma lipoprotein(a) [Lp(a)] and increased cardiovascular risk, and in particular, coronary artery disease.

In one study, 25,131 initially healthy Caucasian participants in the Women's Health Study were followed for ~10 years. rs3798220(C) allele carriers (3.7%) in the placebo (i.e. not receiving aspirin) group had a 2x higher risk of major cardiovascular events than non-carriers (age-adjusted hazard ratio (HR) of 2.21, CI: 1.39-3.52). Among rs3798220(C) carriers, the risk was reduced more than twofold by aspirin: for aspirin compared with placebo the age-adjusted HR was 0.44 (CI: 0.20-0.94). The risk was not significantly reduced among non-carriers (age-adjusted HR=0.91, CI: 0.77-1.08). This interaction between carrier status and aspirin allocation was significant (P=0.048). In summary, rs3798220(C) carriers had higher plasma lipoprotein(a) and had double the risk of cardiovascular events, but also benefited more from taking aspirin.[PMID 18775538]

In another study, compared with noncarriers, carriers of the 4399M risk allele (2.7% of controls) had an adjusted odds ratio for severe CAD of 3.14 (CI: 1.51 to 6.56), and had 5-fold higher median plasma lipoprotein(a) levels (P=0.003), leading to the conclusion that the LPA I4399M SNP is associated with severe CAD and plasma lipoprotein(a) levels.[PMID 17569884]


[PMID 20032323] Genetic Variants Associated with Lp(a) Lipoprotein Level and Coronary Disease

celera says rs3798220 is an independent predictor of risk for

Carriers of the rs3798220(C) have higher levels of plasma Lp(a).


[PMID 20605575] Single variants can explain the association between coronary heart disease and haplotypes in the apolipoprotein(a) locus

OMIM152200
Desc
Variant
Relatedalso
GWAS snp
PMID [PMID 21378990]
Trait
Title Large-scale association analysis identifies 13 new susceptibility loci for coronary artery disease
Risk Allele C
P-val 3E-11
Odds Ratio 1.5100 [1.33-1.70]


[PMID 22192511] KIF6, LPA, TAS2R50, and VAMP8 genetic variation, low density lipoprotein cholesterol lowering response to pravastatin, and heart disease risk reduction in the elderly

Personal tools
Namespaces
Variants
Actions
Navigation
Toolbox