Rs3025039
| is a | snp |
| is | mentioned by |
| dbSNP | rs3025039 |
| nextbio | rs3025039 |
| hapmap | rs3025039 |
| 1000 genomes | rs3025039 |
| hgdp | rs3025039 |
| ensembl | rs3025039 |
| gopubmed | rs3025039 |
| scholar | rs3025039 |
| rs3025039 | |
| pharmgkb | rs3025039 |
| gwascentral | rs3025039 |
| openSNP | rs3025039 |
| 23andMe | rs3025039 |
| 23andMe all | rs3025039 |
| SNP Nexus | |
| SNPshot | rs3025039 |
| SNPdbe | rs3025039 |
| MSV3d | rs3025039 |
| Gene | VEGFA |
| Chromosome | 6 |
| Orientation | plus |
| Position | 43752536 |
| Reference | GRCh37 37.1/131 |
| Max Magnitude | 2 |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | normal |
| (C;T) | 2 | 2.6x increased risk for ARMD |
| (T;T) | 2 | 2.6x increased risk for ARMD |
A study of 190 Taiwanese patients with late wet age related macular degeneration found that the rs3025039(T) allele was associated with increased risk, with an odds ratio of 2.61 (CI: 1.68 to 4.07, p = 1.45 x 10e-5).[PMID 18378209]
Note that this association may be completely due to the tight linkage (D' = 0.99) between this SNP and rs1061170, which has been reported by numerous studies to be associated with ARMD.
[PMID 19594543] Effect of vascular endothelial growth factor polymorphisms on survival in advanced-stage non-small-cell lung cancer
[PMID 19875757] Clinical relevance of vascular endothelial growth factor (VEGFA) and VEGF receptor (VEGFR2) gene polymorphism on the treatment outcome following imatinib therapy
| PharmGKB | PA164891514 |
| Name | VEGFA:C936T |
| Annotation | This SNP was not associated with risk of non-small cell lung cancer. |
| Gene | VEGFA |
| Featue | |
| Evidence | PubMed ID:18223238 |
| Drugs | |
| Diseases | Carcinoma, Non-Small-Cell Lung |
| Curation Level | Curated |
[PMID 20082870] A Single Nucleotide Polymorphism in the Vascular Endothelial Growth Factor Gene Is Associated with Recurrence of Hepatocellular Carcinoma after Transplantation
[PMID 20847577] Vascular Endothelial Growth Factor Gene Polymorphisms and Risk of Neovascular Age-Related Macular Degeneration in a Chinese Cohort
C->T was associated with increased risk for altitude sickness. [PMID 21242666] Polymorphisms of Hypoxia-Related Genes in Subjects Susceptible to Acute Mountain Sickness
[PMID 22129133] VEGFA and VEGFR2 genetic polymorphisms and survival in patients with diffuse large B cell lymphoma
[PMID 22315135] The single-nucleotide polymorphisms +936 C/T VEGF and -710 C/T VEGFR1 are associated with breast cancer protection in a Spanish population
[PMID 22439647] The outcome and predictive factors of sunitinib therapy in advanced gastrointestinal stromal tumors (GIST) after imatinib failure - one institution study
[PMID 22162628] Polymorphisms in the vascular endothelial growth factor gene and the risk of diabetic retinopathy in Chinese patients with type 2 diabetes