Rs229541

From SNPedia

Jump to: navigation, search
is asnp
is mentioned by
dbSNPrs229541
hapmaprs229541
hgdprs229541
ensemblrs229541
gopubmedrs229541
scholarrs229541
googlers229541
pharmgkbrs229541
hgvbaseg2prs229541
medrefsnprs229541
23andMers229541
SNP Nexus

Chromosome22
Orientationminus
Position35921263
GenotypeEffect
rs229541(C;C)*?
rs229541(C;T)*?
rs229541(T;T)*?


GWAS snp
PMID [PMID 18978792]
Trait Type 1 diabetes
Title Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci
Risk Allele T
P-val 2E-8
Odds Ratio 1.04 [0.97-1.12]
? (C;C) (C;T) (T;T)
GWAS snp
PMID [PMID 19430480]
Trait Type 1 diabetes
Title Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes
Risk Allele
P-val 2E-7
Odds Ratio NR NR
Related to DIABETES MELLITUS, INSULIN-DEPENDENT; IDDM according to omim 222100. See also


PharmGKBPA164740760
Name
AnnotationGWAS results: Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci. (Initial Sample Size: 3,561 cases, 4,646 controls; Replication Sample Size: 6,225 cases, 6,946 controls, 3,064 trios); (Region: 22q13.1; Reported Gene(s): C1QTNF6; Risk Allele: rs229541-T); (p-value= 0.00000002).This variant is associated with Type 1 diabetes.
GeneC1QTNF6
Featue
EvidencePubMed ID:18978792; Web Resource:http://www.genome.gov/gwastudies/
Drugs
DiseasesDiabetes Mellitus, Diabetes Mellitus, Type 1
Curation LevelNon-Curated