Rs2240335
From SNPedia
| is a | snp |
| is | mentioned by |
| dbSNP | rs2240335 |
| hapmap | rs2240335 |
| hgdp | rs2240335 |
| ensembl | rs2240335 |
| gopubmed | rs2240335 |
| scholar | rs2240335 |
| rs2240335 | |
| pharmgkb | rs2240335 |
| hgvbaseg2p | rs2240335 |
| medrefsnp | rs2240335 |
| 23andMe | rs2240335 |
| SNP Nexus |
| Gene | PADI4 |
| Chromosome | 1 |
| Orientation | minus |
| Position | 17674537 |
| Reference | GRCh37 37.1/131 |
| Genotype | Effect |
|---|---|
| rs2240335(G;G)* | ? |
| rs2240335(G;T)* | ? |
| rs2240335(T;T)* | ? |
| ? | (G;G) (G;T) (T;T) | 28 |
|---|---|---|
|
| ||
| Rs2240335 | |
|---|---|
| PubMed | [PMID 12833157] |
| Affy Probeset | SNP_A-8556874 |
| Affy Orientation | same |
| On GW 5.0 | 0 |
| Alleles A/B | G/T |
| Ancestral | G |
| Population | Japan |
| Allele | G |
| Case Freq. | |
| Control Freq. | |
| Odds Ratio Het | |
| Odds Ratio Hom | |
| Odds Ratio All | 1.75 |
| Disease | Rheumatoid Arthritis (RA) |
rs2240335 is in linkage disequilibrium with a polymorphism that increases susceptibility to Rheumatoid Arthritis 1.75 times for carriers of the G allele [PMID 12833157]
| Neighbor | rs2240338 |
| Distance | 352 |
