Rs2180439

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is asnp
is mentioned by
dbSNPrs2180439
hapmaprs2180439
hgdprs2180439
ensemblrs2180439
gopubmedrs2180439
scholarrs2180439
googlers2180439
pharmgkbrs2180439
hgvbaseg2prs2180439
medrefsnprs2180439
23andMers2180439
SNP Nexus

Chromosome20
Orientationplus
Position21801099
GenotypeEffect
rs2180439(C;C)reduced risk of baldness
rs2180439(C;T)*?
rs2180439(T;T)2x increased risk of baldness


Genotypes Magnitude Summary
Rs2180439(C;C) 22 reduced risk of baldness
Rs2180439(T;T) 33 2x increased risk of baldness
spitoon rs2180439(T;T) have 2x increased odds of male pattern baldness.
? (C;C) (C;T) (T;T)
GWAS snp
PMID [PMID 18849994]
Trait Male-pattern baldness
Title Susceptibility variants for male-pattern baldness on chromosome 20p11
Risk Allele C
P-val 2.9999999999999998E-15
Odds Ratio 1.82 [1.45-2.30]
Related to ALOPECIA, ANDROGENETIC, 3; AGA3 according to omim 612421. See also


PharmGKBPA164740798
Name
AnnotationGWAS results: Susceptibility variants for male-pattern baldness on chromosome 20p11. (Initial Sample Size: 296 cases, 347 controls; Replication Sample Size: 319 cases, 234 controls); (Region: 20p11.22; Reported Gene(s): PAX1, BQ013595, BE789145; Risk Allele: rs2180439-C); (p-value= 2.99999999999999E-15).This variant is associated with Male-pattern baldness.
Gene-
Featue
EvidencePubMed ID:18849994; Web Resource:http://www.genome.gov/gwastudies/
Drugs
DiseasesAlopecia
Curation LevelNon-Curated
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