Rs1992662
From SNPedia
| is a | snp |
| is | mentioned by |
| dbSNP | rs1992662 |
| hapmap | rs1992662 |
| hgdp | rs1992662 |
| ensembl | rs1992662 |
| gopubmed | rs1992662 |
| scholar | rs1992662 |
| rs1992662 | |
| pharmgkb | rs1992662 |
| hgvbaseg2p | rs1992662 |
| medrefsnp | rs1992662 |
| 23andMe | rs1992662 |
| SNP Nexus |
| Gene | PTGER4 |
| Chromosome | 5 |
| Orientation | minus |
| Position | 40429608 |
| Genotype | Effect |
|---|---|
| rs1992662(C;C) | increased risk for Crohn's disease |
| rs1992662(C;T) | ? |
| rs1992662(T;T) | 0.76x decreased risk for Crohn's disease |
| Genotypes | Magnitude | Summary |
|---|---|---|
| Rs1992662(C;C) | increased risk for Crohn's disease | |
| Rs1992662(C;T) | ? | |
| Rs1992662(T;T) | 0.76x decreased risk for Crohn's disease |
In several European populations, the most common allele, rs1992662(T), was associated with increased risk for Crohn's disease. Conversely, the odds ratio (pooled over several populations) for the minor allele, rs1992662(C), was 0.76 (CI: 0.63-0.91, p=0.0013).[PMID 17684544]
| ? | (C;C) (C;T) (T;T) |
|---|---|
|
| |
| Neighbor | rs10512734 |
| Distance | 247 |
