Rs11865121
From SNPedia
| Orientation | plus |
| is a | snp |
| is | mentioned by |
| dbSNP | rs11865121 |
| PheGenI | rs11865121 |
| nextbio | rs11865121 |
| hapmap | rs11865121 |
| 1000 genomes | rs11865121 |
| hgdp | rs11865121 |
| ensembl | rs11865121 |
| gopubmed | rs11865121 |
| geneview | rs11865121 |
| scholar | rs11865121 |
| rs11865121 | |
| pharmgkb | rs11865121 |
| gwascentral | rs11865121 |
| openSNP | rs11865121 |
| 23andMe | rs11865121 |
| 23andMe all | rs11865121 |
| SNP Nexus | |
| SNPshot | rs11865121 |
| SNPdbe | rs11865121 |
| MSV3d | rs11865121 |
| Gene | CLEC16A |
| Chromosome | 16 |
| Orientation | plus |
| GMAF | 0.3507 |
| Position | 11166688 |
| Reference | GRCh37 37.1/131 |
| Max Magnitude |
| Make rs11865121(A;A) |
| Make rs11865121(A;C) |
| Make rs11865121(C;C) |
| ? | (A;A) (A;C) (C;C) | 28 |
|---|---|---|
| GWAS snp | |
|---|---|
| PMID | [PMID 19525953] |
| Trait | Multiple sclerosis |
| Title | Meta-analysis of genome scans and replication identify CD6, IRF8 and TNFRSF1A as new multiple sclerosis susceptibility loci |
| Risk Allele | C |
| P-val | 2E-7 |
| Odds Ratio | 1.15 [1.04-1.25] |
[PMID 20405052] The effect of single nucleotide polymorphisms from genome wide association studies in multiple sclerosis on gene expression.
| GET Evidence | |
|---|---|
| rs11865121 | |
| aa_change | |
| aa_change_short | |
| impact | pathogenic |
| qualified_impact | Insufficiently evaluated pathogenic |
| overall_frequency | 0.367188 |
| summary | |
