Rs1160312

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is asnp
is mentioned by
dbSNPrs1160312
hapmaprs1160312
hgdprs1160312
ensemblrs1160312
gopubmedrs1160312
scholarrs1160312
googlers1160312
pharmgkbrs1160312
hgvbaseg2prs1160312
medrefsnprs1160312
23andMers1160312
SNP Nexus

Chromosome20
Orientationplus
Position21998502
GenotypeEffect
rs1160312(A;A)increased risk of baldness
rs1160312(A;G)*?
rs1160312(G;G)reduced risk of baldness


Genotypes Magnitude Summary
Rs1160312(A;A) 22 increased risk of baldness
Rs1160312(G;G) 22 reduced risk of baldness
nature Baldness OR = 1.60, P = 1.1 times 10-14). see also gs122

The risk allele is assumed to be rs1160312(A). Note that a haplotype consisting of rs201571(T) - rs6036025(G) has a perfect correlation (r2 = 1) with rs1160312(A), at least in the Caucasian population studied.

? (A;A) (A;G) (G;G)
GWAS snp
PMID [PMID 18849991]
Trait Male-pattern baldness
Title Male-pattern baldness susceptibility locus at 20p11
Risk Allele A
P-val 1E-14
Odds Ratio 1.60 [1.42-1.80] (males)
Related to ALOPECIA, ANDROGENETIC, 3; AGA3 according to omim 612421. See also


PharmGKBPA164740799
Name
AnnotationGWAS results: Male-pattern baldness susceptibility locus at 20p11. (Initial Sample Size: 578 cases, 547 controls; Replication Sample Size: 1,351 cases, 2,485 controls); (Region: 20p11.22; Reported Gene(s): PAX1; Risk Allele: rs1160312-A); (p-value= 0.00000000000001).This variant is associated with Male-pattern baldness.
Gene-
Featue
EvidencePubMed ID:18849991; Web Resource:http://www.genome.gov/gwastudies/
Drugs
DiseasesAlopecia
Curation LevelNon-Curated