Rs1154155

From SNPedia

Jump to: navigation, search
is asnp
is mentioned by
dbSNPrs1154155
hapmaprs1154155
hgdprs1154155
ensemblrs1154155
gopubmedrs1154155
scholarrs1154155
googlers1154155
pharmgkbrs1154155
hgvbaseg2prs1154155
medrefsnprs1154155
23andMers1154155
SNP Nexus

Chromosome14
Orientationplus
Position22072523
GenotypeEffect
rs1154155(G;G)2.5x increased risk for narcolepsy
rs1154155(G;T)1.94x increased risk for narcolepsy
rs1154155(T;T)normal


Genotypes Magnitude Summary
Rs1154155(G;G) 2.52.5 2.5x increased risk for narcolepsy
Rs1154155(G;T) 1.51.5 1.94x increased risk for narcolepsy
Rs1154155(T;T) 00 normal

rs1154155 is a SNP in the TCRA T-cell receptor alpha gene. The minor allele is (G).

A study of 1,830 people with narcolepsy and cataplexy (a sudden loss of muscle tone that can cause people to collapse) compared to 2,164 healthy controls concluded that several SNPs in the TCRA gene were linked. The most significant association was with this SNP, rs1154155, with an average allelic odds ratio of 1.69 (genotypic odds ratios 1.94 and 2.55, p < 10e-21).[PMID 19412176]

Note the following, though, as quoted from a Science News article: "Even with all of the known genetic risk factors, including the newly discovered version of the T cell receptor gene, a person has only a 1.5 percent chance of developing narcolepsy, (the lead scientist) says. That suggests that, while narcolepsy is probably an autoimmune disorder, further genetic and environmental triggers and risk factors remain to be found."

? (G;G) (G;T) (T;T)


[PMID 19927159] Polymorphism located in TCRA locus confers susceptibility to essential hypersomnia with HLA-DRB1*1501-DQB1*0602 haplotype