rs80359885
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;AGAAAAGTAGTGAATAC) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(-;CAGAAAAGTAGTGAATA) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(AGAAAAGTAGTGAATAC;AGAAAAGTAGTGAATAC) | 0 | common in clinvar |
(CAGAAAAGTAGTGAATA;CAGAAAAGTAGTGAATA) | 0 | common/normal |
Make rs80359885(-;-) |
Reference | GRCh38 38.1/142 |
Chromosome | 17 |
Position | 43076584 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80359885 |
dbSNP (classic) | rs80359885 |
ClinGen | rs80359885 |
ebi | rs80359885 |
HLI | rs80359885 |
Exac | rs80359885 |
Gnomad | rs80359885 |
Varsome | rs80359885 |
LitVar | rs80359885 |
Map | rs80359885 |
PheGenI | rs80359885 |
Biobank | rs80359885 |
1000 genomes | rs80359885 |
hgdp | rs80359885 |
ensembl | rs80359885 |
geneview | rs80359885 |
scholar | rs80359885 |
rs80359885 | |
pharmgkb | rs80359885 |
gwascentral | rs80359885 |
openSNP | rs80359885 |
23andMe | rs80359885 |
SNPshot | rs80359885 |
SNPdbe | rs80359885 |
MSV3d | rs80359885 |
GWAS Ctlg | rs80359885 |
Merged from | Rs397509166 |
Max Magnitude | 6 |
rs80359885, also known as 4491del17, c.4372_4388del and p.Gln1458_Tyr1463?fs, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | Rs80359885(CAGAAAAGTAGTGAATA;CAGAAAAGTAGTGAATA) rs80359885(-;-) |
Alt | Rs80359885(CAGAAAAGTAGTGAATA;CAGAAAAGTAGTGAATA) rs80359885(-;-) |
Reference | Rs80359885(AGAAAAGTAGTGAATAC;AGAAAAGTAGTGAATAC) |
Significance | Pathogenic |
Disease | Familial cancer of breast Breast-ovarian cancer |
Variation | info |
Gene | BRCA1 |
CLNDBN | Familial cancer of breast Breast-ovarian cancer, familial 1 |
Reversed | 1 |
HGVS | NC_000017.10:g.41228600_41228616del17 |
CLNSRC | Breast Cancer Information Core (BRCA1) |
CLNACC | RCV000048541.2, RCV000112329.2, |