rs80359411
From SNPedia
Merged into | rs80359406 |
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;A) | 6 | BRCA2 variant considered pathogenic for breast cancer |
(A;A) | 0 | common in clinvar |
(GA;GA) | 0 | common in clinvar |
Make rs80359411(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 32338215 |
Gene | BRCA2 |
is a | snp |
is | mentioned by |
dbSNP | rs80359411 |
dbSNP (classic) | rs80359411 |
ClinGen | rs80359411 |
ebi | rs80359411 |
HLI | rs80359411 |
Exac | rs80359411 |
Gnomad | rs80359411 |
Varsome | rs80359411 |
LitVar | rs80359411 |
Map | rs80359411 |
PheGenI | rs80359411 |
Biobank | rs80359411 |
1000 genomes | rs80359411 |
hgdp | rs80359411 |
ensembl | rs80359411 |
geneview | rs80359411 |
scholar | rs80359411 |
rs80359411 | |
pharmgkb | rs80359411 |
gwascentral | rs80359411 |
openSNP | rs80359411 |
23andMe | rs80359411 |
SNPshot | rs80359411 |
SNPdbe | rs80359411 |
MSV3d | rs80359411 |
GWAS Ctlg | rs80359411 |
Status | Merged into rs80359406 |
Max Magnitude | 6 |
rs80359411, also known as 4088delA, c.3860_3860delA and p.Asn1287Ilefs, is a variant in the BRCA2 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | Rs80359411(G;G) rs80359411(GAAA;GAAA) |
Alt | Rs80359411(G;G) rs80359411(GAAA;GAAA) |
Reference | Rs80359411(A;A) |
Significance | Pathogenic |
Disease | Familial cancer of breast Breast-ovarian cancer Hereditary cancer-predisposing syndrome not provided Tumor susceptibility linked to germline BAP1 mutations |
Variation | info |
Gene | BRCA2 |
CLNDBN | Familial cancer of breast Breast-ovarian cancer, familial 2 Hereditary cancer-predisposing syndrome not provided Tumor susceptibility linked to germline BAP1 mutations |
Reversed | 0 |
HGVS | NC_000013.10:g.32912352delA |
CLNSRC | Breast Cancer Information Core (BRCA2) |
CLNACC | RCV000044288.4, RCV000077316.6, RCV000131539.1, RCV000212232.2, RCV000214509.1, |