rs80357899
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;TT) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(TT;TT) | 0 | common in clinvar |
Make rs80357899(-;-) |
Reference | GRCh38 38.1/142 |
Chromosome | 17 |
Position | 43092830 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80357899 |
dbSNP (classic) | rs80357899 |
ClinGen | rs80357899 |
ebi | rs80357899 |
HLI | rs80357899 |
Exac | rs80357899 |
Gnomad | rs80357899 |
Varsome | rs80357899 |
LitVar | rs80357899 |
Map | rs80357899 |
PheGenI | rs80357899 |
Biobank | rs80357899 |
1000 genomes | rs80357899 |
hgdp | rs80357899 |
ensembl | rs80357899 |
geneview | rs80357899 |
scholar | rs80357899 |
rs80357899 | |
pharmgkb | rs80357899 |
gwascentral | rs80357899 |
openSNP | rs80357899 |
23andMe | rs80357899 |
SNPshot | rs80357899 |
SNPdbe | rs80357899 |
MSV3d | rs80357899 |
GWAS Ctlg | rs80357899 |
Merged from | Rs397509001 |
Max Magnitude | 6 |
rs80357899, also known as 2819delTT, c.2700_2701delTT and p.Thr900_Phe901ThrTerfs, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | rs80357899(-;-) |
Alt | rs80357899(-;-) |
Reference | Rs80357899(TT;TT) |
Significance | Pathogenic |
Disease | Familial cancer of breast Breast-ovarian cancer |
Variation | info |
Gene | BRCA1 |
CLNDBN | Familial cancer of breast Breast-ovarian cancer, familial 1 |
Reversed | 1 |
HGVS | NC_000017.10:g.41244845_41244846delAA |
CLNSRC | Breast Cancer Information Core (BRCA1) |
CLNACC | RCV000047938.2, RCV000111921.3, |