rs80357180
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;G) | 1 | Benign variant |
(C;T) | 6 | BRCA1 variant reported to be pathogenic for breast cancer |
Make rs80357180(G;G) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43099859 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80357180 |
dbSNP (classic) | rs80357180 |
ClinGen | rs80357180 |
ebi | rs80357180 |
HLI | rs80357180 |
Exac | rs80357180 |
Gnomad | rs80357180 |
Varsome | rs80357180 |
LitVar | rs80357180 |
Map | rs80357180 |
PheGenI | rs80357180 |
Biobank | rs80357180 |
1000 genomes | rs80357180 |
hgdp | rs80357180 |
ensembl | rs80357180 |
geneview | rs80357180 |
scholar | rs80357180 |
rs80357180 | |
pharmgkb | rs80357180 |
gwascentral | rs80357180 |
openSNP | rs80357180 |
23andMe | rs80357180 |
SNPshot | rs80357180 |
SNPdbe | rs80357180 |
MSV3d | rs80357180 |
GWAS Ctlg | rs80357180 |
Max Magnitude | 6 |
aka c.463C>T (p.Gln155Ter or Q155X); and also c.463C>G (p.Gln155Glu or Q155E); the former is a pathogenic mutation, while the latter is benign
ClinVar | |
---|---|
Risk | rs80357180(G;G) rs80357180(T;T) |
Alt | rs80357180(G;G) rs80357180(T;T) |
Reference | Rs80357180(C;C) |
Significance | Probable-non-pathogenic |
Disease | Familial cancer of breast Hereditary breast and ovarian cancer syndrome Breast-ovarian cancer Hereditary cancer-predisposing syndrome not specified |
Variation | info |
Gene | BRCA1 |
CLNDBN | Familial cancer of breast Hereditary breast and ovarian cancer syndrome Breast-ovarian cancer, familial 1 Hereditary cancer-predisposing syndrome not specified |
Reversed | 1 |
HGVS | NC_000017.10:g.41251876G>A; NC_000017.10:g.41251876G>C |
CLNSRC | Database of BRCA1 and BRCA2 sequence variants that have been clinically reclassified by a quantitative integrated evaluation |
CLNACC | RCV000048615.2, RCV000048614.6, RCV000083209.5, RCV000162968.1, RCV000433057.1, |