rs746229647
From SNPedia
Merged into | rs80359405 |
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;TG) | 6 | BRCA2 variant considered pathogenic for breast cancer |
(TG;TG) | 0 | common in clinvar |
Make rs746229647(-;-) |
Reference | GRCh38.p2 38.2/144 |
Chromosome | 13 |
Position | 32338201 |
Gene | BRCA2 |
is a | snp |
is | mentioned by |
dbSNP | rs746229647 |
dbSNP (classic) | rs746229647 |
ClinGen | rs746229647 |
ebi | rs746229647 |
HLI | rs746229647 |
Exac | rs746229647 |
Gnomad | rs746229647 |
Varsome | rs746229647 |
LitVar | rs746229647 |
Map | rs746229647 |
PheGenI | rs746229647 |
Biobank | rs746229647 |
1000 genomes | rs746229647 |
hgdp | rs746229647 |
ensembl | rs746229647 |
geneview | rs746229647 |
scholar | rs746229647 |
rs746229647 | |
pharmgkb | rs746229647 |
gwascentral | rs746229647 |
openSNP | rs746229647 |
23andMe | rs746229647 |
SNPshot | rs746229647 |
SNPdbe | rs746229647 |
MSV3d | rs746229647 |
GWAS Ctlg | rs746229647 |
Status | Merged into rs80359405 |
Max Magnitude | 6 |
rs746229647, also known as c.3847_3848delGT and p.Val1283Lysfs, and formerly also known as c.3846_3847delTG, represents a rare variant in the BRCA2 gene.
The minor allele is pathogenic for breast cancer according to multiple ClinVar sources, and it is also considered a founder mutation in some populations, for example, Denmark.
Note that the ClinVar accession sidebar/box to right (below) links to an outdated accession record for this mutation. The correct URL is http://www.ncbi.nlm.nih.gov/clinvar/variation/37859/.
ClinVar | |
---|---|
Risk | |
Alt | |
Reference | Rs746229647(TG;TG) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer Hereditary breast and ovarian cancer syndrome Hereditary cancer-predisposing syndrome Familial cancer of breast |
Variation | info |
Gene | BRCA2 |
CLNDBN | Breast-ovarian cancer, familial 2 Hereditary breast and ovarian cancer syndrome Hereditary cancer-predisposing syndrome Familial cancer of breast |
Reversed | 0 |
HGVS | NC_000013.10:g.32912339_32912340delGT |
CLNSRC | Breast Cancer Information Core (BRCA2) |
CLNACC | RCV000031440.8, RCV000044280.7, RCV000131095.3, RCV000160281.1, |