rs104886397
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 0 | common in clinvar |
| Make rs104886397(A;T) |
| Make rs104886397(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | X |
| Position | 108680883 |
| Gene | COL4A5 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs104886397 |
| dbSNP (classic) | rs104886397 |
| ClinGen | rs104886397 |
| ebi | rs104886397 |
| HLI | rs104886397 |
| Exac | rs104886397 |
| Gnomad | rs104886397 |
| Varsome | rs104886397 |
| LitVar | rs104886397 |
| Map | rs104886397 |
| PheGenI | rs104886397 |
| Biobank | rs104886397 |
| 1000 genomes | rs104886397 |
| hgdp | rs104886397 |
| ensembl | rs104886397 |
| geneview | rs104886397 |
| scholar | rs104886397 |
| rs104886397 | |
| pharmgkb | rs104886397 |
| gwascentral | rs104886397 |
| openSNP | rs104886397 |
| 23andMe | rs104886397 |
| SNPshot | rs104886397 |
| SNPdbe | rs104886397 |
| MSV3d | rs104886397 |
| GWAS Ctlg | rs104886397 |
| Max Magnitude | 0 |
| ClinVar | |
|---|---|
| Risk | rs104886397(G;G) rs104886397(T;T) |
| Alt | rs104886397(G;G) rs104886397(T;T) |
| Reference | Rs104886397(A;A) |
| Significance | Pathogenic |
| Disease | Alport syndrome |
| Variation | info |
| Gene | COL4A5 |
| CLNDBN | Alport syndrome, X-linked recessive |
| Reversed | 0 |
| HGVS | NC_000023.10:g.107924113A>G; NC_000023.10:g.107924113A>T |
| CLNSRC | ARUP COL4A5 |
| CLNACC | RCV000021577.1, RCV000021576.1, |
[PMID 18332068] Somatic mosaicism for a mutation of the COL4A5 gene is a cause of mild phenotype male Alport syndrome.
[PMID 8651296
] X-linked Alport syndrome: an SSCP-based mutation survey over all 51 exons of the COL4A5 gene.
