rs9469220 has been reported in a large study to be associated with Crohn's disease.
The risk allele (oriented to the dbSNP entry) is (A); the odds ratio associated with heterozygotes is 1.14 (CI 0.98-1.32), and for homozygotes, 1.52 (CI 1.28-1.79). [PMID 17554300]
[PMID 22615847] Association Analysis of the Extended MHC Region in Celiac Disease Implicates Multiple Independent Susceptibility Loci
[PMID 17660530] Risk alleles for multiple sclerosis identified by a genomewide study.
[PMID 20369022] Candidate causal regulatory effects by integration of expression QTLs with complex trait genetic associations.
[PMID 20546594] An application of Random Forests to a genome-wide association dataset: methodological considerations & new findings.
||A meta-analysis of genome-wide association studies for serum total IgE in diverse study populations.
||.09 [0.05-0.12] unit decrease
[PMID 24352087] Candidate genes involved in beneficial or adverse responses to commonly eaten brassica vegetables in a New Zealand Crohn's disease cohort
[PMID 25308886] Functional relevance for multiple sclerosis-associated genetic variants