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rs863225300

From SNPedia

Orientationminus
Stabilizedminus
Geno Mag Summary
(A;C) 7 Choreoathetosis, hypothyroidism, and neonatal respiratory distress
(C;C) 0 common in clinvar


Make rs863225300(A;A)
ReferenceGRCh38.p2 38.2/146
Chromosome14
Position36517960
GeneNKX2-1, NKX2-1-AS1, SFTA3
is asnp
is mentioned by
dbSNPrs863225300
dbSNP (classic)rs863225300
ClinGenrs863225300
ebirs863225300
HLIrs863225300
Exacrs863225300
Gnomadrs863225300
Varsomers863225300
LitVarrs863225300
Maprs863225300
PheGenIrs863225300
Biobankrs863225300
1000 genomesrs863225300
hgdprs863225300
ensemblrs863225300
geneviewrs863225300
scholarrs863225300
googlers863225300
pharmgkbrs863225300
gwascentralrs863225300
openSNPrs863225300
23andMers863225300
SNPshotrs863225300
SNPdbers863225300
MSV3drs863225300
GWAS Ctlgrs863225300
Max Magnitude7

aka c.524C>A (p.Ser175Ter, S175X or S175*)

Considered "definitely pathogenic" in the Movement Disorder Society Genetic mutation database (MDSGene) for autosomal dominant Choreoathetosis, hypothyroidism, and neonatal respiratory distress



ClinVar
Risk rs863225300(A;A)
Alt rs863225300(A;A)
Reference Rs863225300(C;C)
Significance Pathogenic
Disease Choreoathetosis
Variation info
Gene NKX2-1-AS1 SFTA3 NKX2-1
CLNDBN Choreoathetosis, hypothyroidism, and neonatal respiratory distress
Reversed 1
HGVS NC_000014.8:g.36987165G>T
CLNSRC
CLNACC RCV000201946.1,